| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3642 |
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| Symbol | |
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| ID | 5318184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 77941 |
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| End bp | 79716 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775455 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001312388 |
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| Protein GI | 150375792 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGAA TTTGTGGAGA AATCAGGTTC GATGGCGGTT CGCCGTCGGT TAAGGCAGTA
TCGATCATGT CGGACGTCCT GGCGCCGCGC GGACCGGACG GGTCGGGCGT CGTAGTGCGA
GGAAATGTCG GGCTGGGACA TCGGCGTTTG CGCATCCTCG ACCTCTCCGA CAAGTCGCAG
CAGCCGATGA TCGACCCCGA ACTCGGCCTA TCGCTCGTCT TCAACGGTTG CATCTACAAT
TTCCGCGAGC TGAGGTCGGA GCTCGAGGAG AAAGGCTACA AGTTCTTTTC CTCCGGCGAT
ACCGAGGTCA TCCTGAAGGC ATGGCATGCC TGGGGCGAGG AATGCGTCTC CCGGTTCCAC
GGCATGTTTG CCTTCGTCAT TCACGAGCGT GACAGCGGCC GCGTTGTCAT GGCGCGCGAC
CGTTTCGGCA TCAAGCCGCT CTATATCGCC GAAGTCGAGG GTGCGCTGCG CTTTGCTTCC
TCCTTGCCTG CACTCGTCAA GGCGGGTGGT GTCGACACCT CGATCGATGT GGCGGCGCTC
CACAACTACA TGACCTTTCA CGCGGTGGTG CCGCCCCCCC GTACGATCCT GAACGGCGTC
CGCAAGCTTC CTCCGGCGAC CCTTCGCGTT TATGAACGCG GCGGCAGCTT CAAGGACCGG
CGTTATTGGG ATCCGCCCTA TCGCCGGCAG GCGGGCGACG CAGCCATAAC CCGTGAGGAA
TGGCAGGAGC GGCTTCTGGA TGCGCTGCGC ATTGCCGTGA AGCGGCGCAT GATCGCGGAC
GTGCCGGTCG GGGTGCTGCT TTCCGGCGGG GTTGATTCCA GTCTGATTGT CGGACTTCTT
GCTGAAGCGG GTCAGCGCGG CCTGATGAGC TTCTCCGTCG GCTTCGAAGA GGCTAACGGC
GAAAAGGGCG ACGAGTTCGT CTATTCGGAC CTGATTGCCG AGCATTTCGG TACGGACCAC
CGCAAGATCT TCGTTCCGTC CGCCGATTTG ATGGGCGCCT TGCCCGGCAC CATAACCGCT
ATGTCTGAGC CTATGGTTTC CTACGACAAT GTCGGCTTCT ATCTGCTGTC GAAGGAGGTC
TCCAAACACG TGAAGGTGGT GCAGTCCGGC CAGGGAGCGG ACGAGGTTTT CGGCGGCTAT
CACTGGTATC CGCCACTGAT GAACTCGAAC GACGTCGTTG GAGATTACGG CAAGGCGTTT
CGCGACCGTT CCCATGCGGT ATTGGCCACA CAGCTGTCGG ACCTGTGGCT TGCCGATCAC
GATGTGAGCG GCGCGTTGCT CAACGAGCAT CTGCTGCGCG ACGGCGCCGA CACGCCGGTC
GATCAGGCGC TCCGGCTCGA CAGCAATGTC ATGCTCGTCG ACGATCCCGT AAAGCGCGTC
GACAACATGA CGATGGCCTG GGGCCTAGAA GCGCGGGTGC CTTTCCTCGA TCACGAGCTG
GTCGAGCTCG CCGCGCGTAT TCCGCCGGAG GAGAAGCTGC GCGACGGTGG CAAGGGCATC
CTGAAGGACG TGGCCCGCAA GATCGTTCCG AGCGAGGTGA TCGACCGCAA GAAGGGCTAT
TTTCCGGTGC CGCAGCTCAA ATACATTGCG GGTCCATATC TCGACCTGAT CCGCGATACG
CTGAACTCGC AGAGGGCGCG TGAGCGGGGC CTCTTCCGCG ACACCTATCT CGACCGCCTG
TTCGAGCAGC CGTCTGATCA CATCACACCG CTGCGCGGCT CCGAGCTGTG GCAGGTGGGA
CTGCTCGAAA TGTGGCTCGA AGCGCAGGGG GTGTAG
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| Protein sequence | MCGICGEIRF DGGSPSVKAV SIMSDVLAPR GPDGSGVVVR GNVGLGHRRL RILDLSDKSQ
QPMIDPELGL SLVFNGCIYN FRELRSELEE KGYKFFSSGD TEVILKAWHA WGEECVSRFH
GMFAFVIHER DSGRVVMARD RFGIKPLYIA EVEGALRFAS SLPALVKAGG VDTSIDVAAL
HNYMTFHAVV PPPRTILNGV RKLPPATLRV YERGGSFKDR RYWDPPYRRQ AGDAAITREE
WQERLLDALR IAVKRRMIAD VPVGVLLSGG VDSSLIVGLL AEAGQRGLMS FSVGFEEANG
EKGDEFVYSD LIAEHFGTDH RKIFVPSADL MGALPGTITA MSEPMVSYDN VGFYLLSKEV
SKHVKVVQSG QGADEVFGGY HWYPPLMNSN DVVGDYGKAF RDRSHAVLAT QLSDLWLADH
DVSGALLNEH LLRDGADTPV DQALRLDSNV MLVDDPVKRV DNMTMAWGLE ARVPFLDHEL
VELAARIPPE EKLRDGGKGI LKDVARKIVP SEVIDRKKGY FPVPQLKYIA GPYLDLIRDT
LNSQRARERG LFRDTYLDRL FEQPSDHITP LRGSELWQVG LLEMWLEAQG V
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