| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3602 |
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| Symbol | araH |
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| ID | 5318436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 29767 |
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| End bp | 30720 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775416 |
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| Product | L-arabinose transporter permease protein |
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| Protein accession | YP_001312349 |
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| Protein GI | 150375753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGT CCTTGAAAAA ACTCCTTCTC GGCGAGCAGG GCCTGGTGGT TATTTTCGCC
GCCGCATTCC TGGTGGTATC GCTGACGGTT CCGAATTTCC TCACCGAACG CAACATGCTC
GGCCTGCTGC AGTCCGTGGT GACCATCGGT CTCGTCGCCT GCACCATGAT GTTCTGCCTC
GCGTCGCGAG ACTTCGACCT TTCCGTCGGC TCCACCGTCG CCTTCTCGGG AATGGTTGCG
GTCATGGCCT CGAACGCCAC GGGCTCTATC GTGCTCGGGC TTCTGGCGGC GCTTGCCTGC
GGCACTGCCG TGGGTATGGC CAATGGCGTG GTGATCGCGC GCTTCCGCAT CAATGCACTC
ATAACCACCC TGGCGACGAT GCAGATCGTG AGGGGGTTTG CTCTGATCGC GTCGGACGGG
CGCGCAGTCG GCATCAACGA TCCGGTCTTC TATCAGCTTT CATTGTCGAA ATTTCTGTCC
GTGCCCACGC CGATCTGGGT GATGGCATTT TTCTTCGTCG TATTCGGGTT CCTCCTGAAC
CGCACCGTCT TCGGCAAGAA CACGCTCGCG ATCGGCGGTA ACCCGGAAGC CTCCCGGCTC
GCCGGTGTCG ACGTGGCGCG GATGCGAATC TGGATCTTCG CGCTGCAGGG GCTCGTATGC
GCCGTTGCCG GGATCCTGCT GGCCTCGCGC ATCACCTCCG GCCAGCCGAA TGCGGCGACC
GGCCTCGAAC TCTCGGTCAT TTCCGCCTGC GTTCTCGGCG GTGTTTCGCT TGCCGGCGGC
CGGGCGACCA TGACCGGCGT CGTCGTCGGC GTTCTGATCA TGGGCATTGC CGAGAACGTC
ATGAACCTGC TCAATATCCA GGCCTTCTAT CAATACGTGG TGCGCGGCCT CATCCTGCTG
ATCGCGGTCC TCCTCGACAA TCTGCGCTCC GTCGCCGGCC GGCCGCGAGG GTGA
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| Protein sequence | MTTSLKKLLL GEQGLVVIFA AAFLVVSLTV PNFLTERNML GLLQSVVTIG LVACTMMFCL
ASRDFDLSVG STVAFSGMVA VMASNATGSI VLGLLAALAC GTAVGMANGV VIARFRINAL
ITTLATMQIV RGFALIASDG RAVGINDPVF YQLSLSKFLS VPTPIWVMAF FFVVFGFLLN
RTVFGKNTLA IGGNPEASRL AGVDVARMRI WIFALQGLVC AVAGILLASR ITSGQPNAAT
GLELSVISAC VLGGVSLAGG RATMTGVVVG VLIMGIAENV MNLLNIQAFY QYVVRGLILL
IAVLLDNLRS VAGRPRG
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