Gene Smed_3599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3599 
Symbol 
ID5318433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp26228 
End bp26983 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID640775413 
ProductGntR domain-containing protein 
Protein accessionYP_001312346 
Protein GI150375750 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.83049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGGAC GACATGATCA GCCGACGGAT TCGGGCAGCA CGCCTTCTCG TCGTCCCCGT 
GTGCAGAAGG ATGTCACCCG GGCTCTTGCC GCCGACATCT GCGGCGAGAA TTATCCGGCA
GGCAGCTATC TACCGCGGGA GAACGACCTG TGCGAACGCT ACGGCGTCAG CCGAACGGTC
ATACGCGAAT CACTGAAGAT TCTGGAATCG AAGGGGCTGG TGCGCGGTCG TTCACGCGTC
GGCACCGTCG TCTGCAGCAA GGACGAATGG AACATTCTCG ATCAGCAGGT GCTCGAGTGG
ATCGGTGATC GGATTTTCCA GTTCGATCTT CTGAACTGTA TTCTCGAAGC GCGCCGTGCG
ATCGAGCCTG TTGCTGCAGA GTTGGCGGCG AGGCGCGCAA CGGTGCAGGA AATCGCCGAG
ATCGAGCGCG CCTGGCAGCA GATGAGGGAT GCCGAGGGCG ACCTCGCGAA GTTCACGGCA
GCAGACGTCG CTTTTCACGA ATCGCTCCTC AAGGCCAGCC ATAATCAGGT GTTCCAGCAA
CTGGCGAGCA TTATACAGGC CGGCCTCAAA TTCTCGCTGC AGGCCTCCAA CGAGGCGGCG
GACACGCGGG CCGGTGCCGT GGAGATACAC AGGCAACTGG TCGAAGCATT GCGGATGCGG
GACGCGACTG CAGCGCGTGA CTGTTCCTGG CAGCTGCTGG ACCTTGCCGC ACGTGATCTC
GCTCTCGCCG TCGAGCGACA CTCACCTCCG GCGTGA
 
Protein sequence
MQGRHDQPTD SGSTPSRRPR VQKDVTRALA ADICGENYPA GSYLPRENDL CERYGVSRTV 
IRESLKILES KGLVRGRSRV GTVVCSKDEW NILDQQVLEW IGDRIFQFDL LNCILEARRA
IEPVAAELAA RRATVQEIAE IERAWQQMRD AEGDLAKFTA ADVAFHESLL KASHNQVFQQ
LASIIQAGLK FSLQASNEAA DTRAGAVEIH RQLVEALRMR DATAARDCSW QLLDLAARDL
ALAVERHSPP A