Gene Smed_3594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3594 
Symbol 
ID5318974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp22728 
End bp23702 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content64% 
IMG OID640775409 
Product2-keto-3-deoxy-galactonokinase 
Protein accessionYP_001312342 
Protein GI150375746 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.943632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAATCC ATATAACTTT GAAGGAGATG GCCTTGCCGG ACGCTGCATA TGAACCTGTC 
ACGGTCGTGC TCGATTGGGG CACCACGAAC TTCCGGGCTT TCCTGGTGAA ATCGGACGGC
TCGATTGTCG ATGAAAAAAT AGGCGACCGG GGAATCCAGT CGGTCACCAA AGGCGAGCAC
GCGCGCGTCG TTAGCGAAGG CCTCGCATCC TGGCGCGCCG AATACGGCCC GCTCGACATC
GTGGCGGCAG GAATGATCGG GAGCCGCAAC GGATGGATCG AGATGCCTTA TGTGCCGACC
CCGGCGGCGG CCGGGGACCT GGCCGCCGCG TGCCGCACCA TCGAACTTGC GCAGGGAGAC
CGGCTTACCT TTTTACCGGG CCTGACGGAT CTGACGGCCT TTCCTTTCCC GGACGTCATG
CGCGGCGAGG AGACCCAGCT CGTCGGCTTC GGCCTGAATA GGGACATGGT CATCGTCCTG
CCCGGGACGC ATGCAAAATG GGCCGAGATC AAAGGCGGCC GCATCGAGCG TTTCCGCACC
TTCGTCACCG GTGAAATCTA CGCGACGCTG GCCAGCCATT CCTTCCTGTC GAAGGTCGCG
ACGGCCGAGC GCGACCATGC CACAGCGGCT TTCGCTGAAG GCATTGCGCT GGCGCAGCAA
GAATGCGCTC GGGCCGGCGG CTTGTTGACA CGGCTCTTTG CCGTCAGAAC CGGCTGGCTT
GCCGGTACGA TCACACCGGA CGAAATGAAG AGCCGCCTTT CCGGGCTCAT CGTCGGATGG
GAATTTGTCG AGGCGCGGGC CGGCGGCTGG TTCAAGGAAG TGGACACGAT CGCGGTGGTC
GGCGACGACG ATCTGGTCGA GGTCTATGAA AGGGTGGCCA CGGCATTTGG CCTGGAGCTG
GCGCCCGCAC CGGCTGACGC GGCGATCCGG GGTGCCCTGG AGATCTCGGG GCGTCGCTCG
GCAGCCGCGA CATGA
 
Protein sequence
MSIHITLKEM ALPDAAYEPV TVVLDWGTTN FRAFLVKSDG SIVDEKIGDR GIQSVTKGEH 
ARVVSEGLAS WRAEYGPLDI VAAGMIGSRN GWIEMPYVPT PAAAGDLAAA CRTIELAQGD
RLTFLPGLTD LTAFPFPDVM RGEETQLVGF GLNRDMVIVL PGTHAKWAEI KGGRIERFRT
FVTGEIYATL ASHSFLSKVA TAERDHATAA FAEGIALAQQ ECARAGGLLT RLFAVRTGWL
AGTITPDEMK SRLSGLIVGW EFVEARAGGW FKEVDTIAVV GDDDLVEVYE RVATAFGLEL
APAPADAAIR GALEISGRRS AAAT