Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1923 |
Symbol | |
ID | 5297945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1909285 |
End bp | 1909956 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640770189 |
Product | hypothetical protein |
Protein accession | YP_001307140 |
Protein GI | 150021786 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00116502 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGT TTATTGATAG ACTTTTTCCA GAAGTTTCAC CTACTAAACT TTTAAGTGAA CATGCGCAGT TTTGTCTAAA TGCAGGTGAA TTAGTTCCAA AAGTTTTAGA GGATTATTTT AGTGGGAAAG ATATTTTAGA ATATTCAAAT CAAATTGATG AGTTTGAATC TAGTGCTGAT GAAATAAAAA CTAAGTTGAG GGAAGTTTAC ACAAAGTTGA GATGGAGTTA TTTTGACAGA ATAGATGCAT TAGAGATAGT TCACAATCAG GATTCTATCA TAGATGCAGT AGATGATTTT GTAAAAATAA TGACAATGAA TAAAGTAGAC AATTGTCCAG ATGAAGTGGT GAAAAGGATA AAAGAGATGG GAGATTATAT TAAAGAAGTA ATAAAGTATA TGAAAGTTAC AGTTGATGAA TTAAGGAATG TTGTTGAATC TGATTTCTCG CCTGTTGAAA TAGAAAGAGA GGATAACCTA ACTTTTGATG TAGAAAAGGA TGAAAGTTTC ACTGATAAAC TAGGTATTGA AATTGGAAGA TTACTTTATT CTTACAAAAA TACGATGAAT GGAGTGGATA TTATATTTTT AAATAACATT GTCATACTAA TGATGAAGAT AGCAGATAGA GCGGAAAATG TTGTTGAGAG AATAAGGATG ATAATAAGAT AA
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Protein sequence | MKRFIDRLFP EVSPTKLLSE HAQFCLNAGE LVPKVLEDYF SGKDILEYSN QIDEFESSAD EIKTKLREVY TKLRWSYFDR IDALEIVHNQ DSIIDAVDDF VKIMTMNKVD NCPDEVVKRI KEMGDYIKEV IKYMKVTVDE LRNVVESDFS PVEIEREDNL TFDVEKDESF TDKLGIEIGR LLYSYKNTMN GVDIIFLNNI VILMMKIADR AENVVERIRM IIR
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