| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1874 |
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| Symbol | |
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| ID | 5297262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1859470 |
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| End bp | 1860168 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640770142 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001307093 |
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| Protein GI | 150021739 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGAAA AAAAGTATAC AGCAAATGGT AATTCCTTTA TCTTGTTTGA CATTACTGAC
ACCTCATTAA CAAGTAATGA GAAAAAAGAA TTAGTAATAA AAAAATGCCA AGATAGAGAT
GGTGCATTAT TTGTAGAAAC AAAAGATGGA ATGTATTTCA TGGAATACTA TAACAAAGAC
GGAAGCAAAG CGCCATTTTG TGGTAACGGA GCAAGAGCTT TTTTATTTTA CCTAATCAAA
GAGAAGAAAG CAAATGTGGA TAAGTTTCTC ACTGAAAGTG GAATAGTATC AGGAAAAATA
CTAAATGAAA AAATTTTAAT AAAAATGCCT AATCCGTTGG TTGCCAGAAA GATTAATGTA
GAAAATTTTT CAGGTTATCT ATTAACGGTA GGTGTACCAC ATTTTGTGAC ATTTGTAGAT
GATATAGAAC ATATTGACGT TAAAAATATA GGCAAAAAAA TCAGGAATAA ACTGGACGCA
AATGTAAACT TTGTTGAAAA AATTTCTAAA AATGAAATCA AAGTTCGTAC ATTTGAAAGA
GGCGTGGAAG ACGAAACATT ATCATGTGGA AGTGGAGTAA CAGCTTCAGC TATTGTATTG
AATGAATCTA AAGTTAAGGT TCACACTAGA GGTGGAATAT TGCATATCTA TACATTAAAT
GATGGATTTT ATTTAGAAGG AGATGTGGAA AATGTTTAG
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| Protein sequence | MNEKKYTANG NSFILFDITD TSLTSNEKKE LVIKKCQDRD GALFVETKDG MYFMEYYNKD
GSKAPFCGNG ARAFLFYLIK EKKANVDKFL TESGIVSGKI LNEKILIKMP NPLVARKINV
ENFSGYLLTV GVPHFVTFVD DIEHIDVKNI GKKIRNKLDA NVNFVEKISK NEIKVRTFER
GVEDETLSCG SGVTASAIVL NESKVKVHTR GGILHIYTLN DGFYLEGDVE NV
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