| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1872 |
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| Symbol | |
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| ID | 5296630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1857095 |
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| End bp | 1858225 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640770140 |
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| Product | YidE/YbjL duplication |
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| Protein accession | YP_001307091 |
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| Protein GI | 150021737 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.590768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCAAAATC CATACTTTTT GTTGTTTCTA ACCATAACTA CTGGATTATT AATCGGAAGT
ATTAAAGTCA AAAACTTCAA ACTTGGCTCA TCAGGAACTC TGTTTACTGG TATTTTCTTT
GGTTGGATTT TTCAAAATTT TATACATTCT GCTCAAAAAA TTAACGAACT GCAAATTACC
TTTCAAAATA TCTTCCAATT TTCACTAATT TTATTTGTTT CATCTATCGG ATTAATCGCT
TCAAAAGAAA TAAAATTCAT ATTAAAAAAA TTCGGTTTAA AGTTCATCAT CCTTGCCTTT
CTCATAACAT TCTCTGGTTT CATATTTATT CTCATTTCAA TCTTTATAAC CAAAATTAAT
CCATATAACT TAATAGGCGT TTTTTCAGGA AGTTTAACAA GCTCACCTGG TCTAGCTACT
GCAATAGAAG GTTCGACAAA AAGTAATGAA ATTATATATG GATATACAAT TGGTTATATT
CCAGGAATTT TAGCAGTTAT CTTTTCAATT TATCTCATTC CACCTATTTT CAAAATTAAC
ATTGAATCAG AAAAAAACAC AATCTATATT CAAAGCGAAC AAAGTAACAT AAAAAGTTTT
AATCTCTTAT CTTATTCTTT AGTAATTTTA ATTGGTATTT TAATAGGAAA TATAGATATA
CCACTAAAAT TTTCAACGGT AAAATTAGGA AAAACTGGAG GAATACTATT GAGTGCTCTG
TTTTTTGGAA ACATTGAAAA ATTAGGGAAT ATCAATTTTT CTTTTAACAA AGACACATTA
AAATCTCTCC AAAACATAGG ACTCGTGATG TTTTTATCAT CTATTGGTTT AAAATCAGGA
TACAATATCA TTGAAAATTT TAATAAGTAT AGCGCTATGC TTATGCTAAT TTCATTCATT
ACTGCAATAT TTTCTATACT AGTTGGCTTT ATAATTGGCA GATACATCTT CAAACTAAAC
TGGACAATCC TTGCCGGTAC AATCACAGGT GGTATGACAA GTACACCAGG ATTAGGAGCA
GCATTAGATT CTACAAAAAG TGAGCATGCA TTAGCTGGTT ACGGAGCAAC ATATCCTTTT
GCATTACTTG GAATGGTTAT CTTTAACAAA ATTTTAATAT TATTAACCTA A
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| Protein sequence | MQNPYFLLFL TITTGLLIGS IKVKNFKLGS SGTLFTGIFF GWIFQNFIHS AQKINELQIT
FQNIFQFSLI LFVSSIGLIA SKEIKFILKK FGLKFIILAF LITFSGFIFI LISIFITKIN
PYNLIGVFSG SLTSSPGLAT AIEGSTKSNE IIYGYTIGYI PGILAVIFSI YLIPPIFKIN
IESEKNTIYI QSEQSNIKSF NLLSYSLVIL IGILIGNIDI PLKFSTVKLG KTGGILLSAL
FFGNIEKLGN INFSFNKDTL KSLQNIGLVM FLSSIGLKSG YNIIENFNKY SAMLMLISFI
TAIFSILVGF IIGRYIFKLN WTILAGTITG GMTSTPGLGA ALDSTKSEHA LAGYGATYPF
ALLGMVIFNK ILILLT
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