| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1839 |
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| Symbol | |
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| ID | 5296773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1823011 |
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| End bp | 1824282 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640770107 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001307059 |
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| Protein GI | 150021705 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00841086 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATATT TGTTTCTTGT TATTGCCGTA TTAATCGCAA TAAATATAAC TATATTAAAC
ACTTTTAGAA AATTAAAGAA AAATTGTAAT ATCTTAAATC TTTCACTAAA AAAAATAAAA
GAATCTTTGG GGGAGGATCC AAATTCTCCT CCTCTTTATG TTTCAGAAAA GATTAGAAAA
AAAATAGTTA GTTTAGAAGA AAACATATAT GAATTAGAGC TTTCACTAAA GAATCATTTA
ACAATATTAA ACAACATTGT AGATCCTATA ATAATTTCCA AAAAAGATGG AACAATAACT
TTTGCAAATA TGGAAGCACG TAATATAACT AGACCCGGCG TTGAAGGTAG AAAATTATAT
GAAGTATTTG AAGATTACTA TGTAAACCAA ATGTTTGAAG AAGCTCAAAA TAAAAAAGAA
ATAACATCTG GCGAAATTAA CCTCTTTGTT AACGGTGAAA AAAAATACTA TGAATTAAAA
ATTGTACCCG TCACATTAGA ACAAAATAAT GAAAGATATA TAATAATATT GCATGATGTA
ACTCAAGAAA GAATATTGGA AAATGCAAGA AAAGAATTTA TTTCAAATGT CTCACACGAG
CTTAGAACAC CATTAACATC AATCCATGGA TATGCCGAAG CACTTCTAGA GGATAATTTA
GATGATAAAG AATTAATAAG AAGATTTCTA ACAATTATTG AATCTGAAGC TGCAAGAATG
ACTCGATTAA TAAATGATTT ACTTGATTTA GAAAAATTAG AATCCGGAAA TACACAATTT
ATTTTCGAAA AAATTAACTT TACCGAAATT TTAGAACACG TTAGGAATAT AATTGAACCA
CTTACTAAAG ACTACAACGT AGATGTAGAA TTTGTTTCCC CAGATAAAAT AGAACTTATT
GGAGATAAAG ATAGATTGAC ACAAATGGTT TTGAACCTCG TAGATAACGC AGTAAAATAT
ACATCTTTAA AAGAAAAAGG TGAAAAAAAA GTTCTAGTAG AAGCGTATAA AGATAATAAT
CACGTTAAAT TAATTGTAAA AGATACAGGA GTTGGAATTC CTGAAAAGGC TCAAAAAAAG
CTATTTGAAA GGTTTTACAG AGTAGATAAA GCCAGAAGTA GAAAAATGGG AGGAACTGGT
TTGGGATTAT CGATAGTAAA AACAATAGTC GAAAAACATA ATGGCACGAT TGAGTTTACA
AGTAAGGAAG GAGTAGGTAC GAAATTTATA GTAACTTTAC CAGTAGGAGG TATTCAAAAT
GAGAGCATAT GA
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| Protein sequence | MVYLFLVIAV LIAINITILN TFRKLKKNCN ILNLSLKKIK ESLGEDPNSP PLYVSEKIRK
KIVSLEENIY ELELSLKNHL TILNNIVDPI IISKKDGTIT FANMEARNIT RPGVEGRKLY
EVFEDYYVNQ MFEEAQNKKE ITSGEINLFV NGEKKYYELK IVPVTLEQNN ERYIIILHDV
TQERILENAR KEFISNVSHE LRTPLTSIHG YAEALLEDNL DDKELIRRFL TIIESEAARM
TRLINDLLDL EKLESGNTQF IFEKINFTEI LEHVRNIIEP LTKDYNVDVE FVSPDKIELI
GDKDRLTQMV LNLVDNAVKY TSLKEKGEKK VLVEAYKDNN HVKLIVKDTG VGIPEKAQKK
LFERFYRVDK ARSRKMGGTG LGLSIVKTIV EKHNGTIEFT SKEGVGTKFI VTLPVGGIQN
ESI
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