Gene Tmel_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1821 
Symbol 
ID5297844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1806136 
End bp1807347 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content31% 
IMG OID640770089 
Productglycosyl transferase, group 1 
Protein accessionYP_001307041 
Protein GI150021687 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0709671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAA AACTTCCCCA AAAAAGCATT AAAGATTATG AATTTATTTC AAAAAATGAC 
GTTGAAGAAT TAATTGAACT TGCTAAAAAT TTAAAAAATC TAAAGGTTAT TCATGTAAAT
GCTACGTCTT ATGGTGGAGG AGTTGCAGAA CTTTTGTACA CCCTTATTCC GTTGATGAAT
AACCTAGGAT TGAATGCGCA GTGGGAAGTA TTAGAAGCTC CAATGGAATT TTTCAACATT
ACAAAAAAAA TACACAACGC TTTTCAAGGT GAAGATATAG AGCTATCCGA AGATGAATTG
GAATTTTATG TTAAAATAAA CAAAGAAAAT GCTGAAAAGT TAGACCTTGA TGCTGATGTT
GTAATAATTC ATGATCCACA ACCATATTTA ATTCCAATGT TCAAGAATGG AAATTATATT
TGGAGATGTC ACATTGATAC ATCTTCACCA AATCTCAAAA TATGGGACAA AGTTATTACA
TTAGCAAACA GAAAGTACAA AAAAGCATTA TTTCACTTAA AAGAATACTT CCAAGAACCA
TTTAAAAGCA TTGCAGTAGA ATTTCCTCCA AGTATTGATC CATTAAGTGA TAAAAACAGA
AAGCTATCTG AAAATACAAT AAAAGAAATT GTTGAAAAGT ACGGTATTGA TTTAAATAGA
CCTATAATAA CAGTTGTAGC AAGATTTGAC CCTTGGAAAG ATTTAAAGAG TGCTATAAAT
GTATACAAAA TCTTAAAAGA AAGAATAGAC ATTCAGCTAT TAATTGTCTC AGCTATGGCA
AAAGATGATC CAGAAGGCTG GATATTGTTT GAAGATATAC TAAGATACGC CGGCACAGAT
AGAGACATTC ACTTCTTAAC CGACTTAAAA GGTGTGGGGC ATCCGGAAGT TAATGCTTTT
CAGACAATAT CTACAGTAGG ACTTCATACG GCTACAAAGG AAGGATTTGG TTTGGTAATT
TCTGAAATGT TATGGAAAGG TAACCCTGTT GTTGCAAGGC CAGTTGGTGG AATTAATTTA
CAGATAATTG ATGGATACAA TGGATTTTTA AGGTATAATA TAAATGAGCT TGCAGATGCT
ATCTTTGAAA TTATAAAAAA TAGCAAACTT AGAGAAGAAA TGGGAAAAAA TGCAAAAAAA
GTTGTTAAAA AACATTTTTT AACAACTTCC CATTTAAAAA GATATCTAAA AATAATTAGC
GAGGTGATTT GA
 
Protein sequence
MKVKLPQKSI KDYEFISKND VEELIELAKN LKNLKVIHVN ATSYGGGVAE LLYTLIPLMN 
NLGLNAQWEV LEAPMEFFNI TKKIHNAFQG EDIELSEDEL EFYVKINKEN AEKLDLDADV
VIIHDPQPYL IPMFKNGNYI WRCHIDTSSP NLKIWDKVIT LANRKYKKAL FHLKEYFQEP
FKSIAVEFPP SIDPLSDKNR KLSENTIKEI VEKYGIDLNR PIITVVARFD PWKDLKSAIN
VYKILKERID IQLLIVSAMA KDDPEGWILF EDILRYAGTD RDIHFLTDLK GVGHPEVNAF
QTISTVGLHT ATKEGFGLVI SEMLWKGNPV VARPVGGINL QIIDGYNGFL RYNINELADA
IFEIIKNSKL REEMGKNAKK VVKKHFLTTS HLKRYLKIIS EVI