Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1821 |
Symbol | |
ID | 5297844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1806136 |
End bp | 1807347 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640770089 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001307041 |
Protein GI | 150021687 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0709671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGTAA AACTTCCCCA AAAAAGCATT AAAGATTATG AATTTATTTC AAAAAATGAC GTTGAAGAAT TAATTGAACT TGCTAAAAAT TTAAAAAATC TAAAGGTTAT TCATGTAAAT GCTACGTCTT ATGGTGGAGG AGTTGCAGAA CTTTTGTACA CCCTTATTCC GTTGATGAAT AACCTAGGAT TGAATGCGCA GTGGGAAGTA TTAGAAGCTC CAATGGAATT TTTCAACATT ACAAAAAAAA TACACAACGC TTTTCAAGGT GAAGATATAG AGCTATCCGA AGATGAATTG GAATTTTATG TTAAAATAAA CAAAGAAAAT GCTGAAAAGT TAGACCTTGA TGCTGATGTT GTAATAATTC ATGATCCACA ACCATATTTA ATTCCAATGT TCAAGAATGG AAATTATATT TGGAGATGTC ACATTGATAC ATCTTCACCA AATCTCAAAA TATGGGACAA AGTTATTACA TTAGCAAACA GAAAGTACAA AAAAGCATTA TTTCACTTAA AAGAATACTT CCAAGAACCA TTTAAAAGCA TTGCAGTAGA ATTTCCTCCA AGTATTGATC CATTAAGTGA TAAAAACAGA AAGCTATCTG AAAATACAAT AAAAGAAATT GTTGAAAAGT ACGGTATTGA TTTAAATAGA CCTATAATAA CAGTTGTAGC AAGATTTGAC CCTTGGAAAG ATTTAAAGAG TGCTATAAAT GTATACAAAA TCTTAAAAGA AAGAATAGAC ATTCAGCTAT TAATTGTCTC AGCTATGGCA AAAGATGATC CAGAAGGCTG GATATTGTTT GAAGATATAC TAAGATACGC CGGCACAGAT AGAGACATTC ACTTCTTAAC CGACTTAAAA GGTGTGGGGC ATCCGGAAGT TAATGCTTTT CAGACAATAT CTACAGTAGG ACTTCATACG GCTACAAAGG AAGGATTTGG TTTGGTAATT TCTGAAATGT TATGGAAAGG TAACCCTGTT GTTGCAAGGC CAGTTGGTGG AATTAATTTA CAGATAATTG ATGGATACAA TGGATTTTTA AGGTATAATA TAAATGAGCT TGCAGATGCT ATCTTTGAAA TTATAAAAAA TAGCAAACTT AGAGAAGAAA TGGGAAAAAA TGCAAAAAAA GTTGTTAAAA AACATTTTTT AACAACTTCC CATTTAAAAA GATATCTAAA AATAATTAGC GAGGTGATTT GA
|
Protein sequence | MKVKLPQKSI KDYEFISKND VEELIELAKN LKNLKVIHVN ATSYGGGVAE LLYTLIPLMN NLGLNAQWEV LEAPMEFFNI TKKIHNAFQG EDIELSEDEL EFYVKINKEN AEKLDLDADV VIIHDPQPYL IPMFKNGNYI WRCHIDTSSP NLKIWDKVIT LANRKYKKAL FHLKEYFQEP FKSIAVEFPP SIDPLSDKNR KLSENTIKEI VEKYGIDLNR PIITVVARFD PWKDLKSAIN VYKILKERID IQLLIVSAMA KDDPEGWILF EDILRYAGTD RDIHFLTDLK GVGHPEVNAF QTISTVGLHT ATKEGFGLVI SEMLWKGNPV VARPVGGINL QIIDGYNGFL RYNINELADA IFEIIKNSKL REEMGKNAKK VVKKHFLTTS HLKRYLKIIS EVI
|
| |