Gene Tmel_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1804 
Symbol 
ID5297347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1788480 
End bp1788704 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content32% 
IMG OID640770072 
ProductRNA-binding protein 
Protein accessionYP_001307024 
Protein GI150021670 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000242663 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAC TCCTTGAGTA CATACTCAAG GGGATTGTAA AGAATCCCGA TGAGGTTGTT 
GTACTTGAAT TTAACGAGGA TGGGAAAAAA GTTTTTGAAA TATCTGTTAA TTCTGAAGAT
GTTGGACAAG TAATCGGTAA AGATGGTAGA ACAATAAAGT CAATAAAAAT TTTATTATCG
TCAATAACTG ATGAGAATGA TTTTATTTTG AAGGTGGTAA GATGA
 
Protein sequence
MKELLEYILK GIVKNPDEVV VLEFNEDGKK VFEISVNSED VGQVIGKDGR TIKSIKILLS 
SITDENDFIL KVVR