| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1777 |
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| Symbol | |
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| ID | 5297345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1766385 |
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| End bp | 1767902 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640770045 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001306997 |
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| Protein GI | 150021643 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.229891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAATA ATCAAATTTT TAAGGGGGGA GTAGTTTTGG TAAAGATAGA TGGAAACACT
TTAACAATCG ATGATGTTCA TAATGTTGCA AGAAATAAAG AAGATGTAAC TCTTGATCCA
GAAGCAAAAT TAAGGATTGA AAAATCAAGA GAAAACATTG AAAAAATTTT AAAAGATGAA
AAACCAGTTT ATGGTGTAAA TACTGGATTT GGTGCGTTGG TAAATGTAAG AATTTCAAAA
GAAGAGTTAG CTGCTCTTCA GAGGAACATA GTATTATCTC ATGCAGCAGG AATTGGTAAG
TCACTAGAAC CTGATGTTAT AAGGGCTATG ATGCTTTTGA GGGCTAATTC TTTAGCAAAG
GGTTTTTCAG GTGTTAGACC GTTGGTTATT GAAAAATTAA TTGAATTTTT GAATAAAGAT
GTTGTACCAT TTGTGCCAGA AATGGGTAGT GTTGGTGCAA GCGGGGATTT GGCACCACTT
TCACATATTG CTATGGCATT AATTGGTGAA GGTTATATAA TGTCTGGAAA TAAAAAGATT
AAAACTAAGC AGTTTTTAGA TTCAAAAGGT ATTAAACCTT TGGTATTAAG AGAAAAAGAA
GGATTGAGTT TACTAAATGG AACACAATTT ATGACATCGA TTTTGTCACT GTTAGTAAGA
GATATGTTCA AATTAATTGA AGTTGCAACT TTAGTGGCAG CTGGAGCTGT TGATGTGTTG
CTTGGAACTC CAAAAGCTTA TGATGAAAGA ATACAATTAG CAAGAAATCA CAAAGGACAA
ATTTACATTG CAAAGTTGTT GAGAGATTAT TTATCAAATA GTGAATTAAG AGAGTCTCAT
ATTGATTGTG GAAATGTACA GGATGCATAC ACCCTTAGAA CAATTCCACA AGTTTATGGT
GCAGTATATG ATATCCTTGA ATTTGCAAAA AGCGTAGTTG AAAATGAAAT AAATGCTGCA
ACAGATAATC CTTTAATCTT TGATGGAGAA GTAATAAGTG GCGGAAATTT TCATGGTGAA
CCTGTTGCTC TTGTTTGTGA TTATCTTTCA ATTGCCTTGA CAGATATGGG AAATATGATT
GAAAGACGAA TTGATAGATT GGTAAATCCT ATGGTTAATA GAGGTCTTGC ACCGTTTCTT
GCAACTGGTA AAGAAGGATT GAATTCTGGA TACATGATTT GGCAATATAC AGCGGCAGCA
ATTTGTAATG AAAATAAGGT TTTATCTCAT CCTGCAACTT CTGATACTAT TCCAACATCA
GCATATCAGG AGGATCATGT AAGTATGGGT GCAACAGCTG CAAGAAAATT AAAAAAAATC
TATTCAAACC TTATTAATTT AATATCAATA GAGGCAATGT TGGTTAAAGT TGCATTGGAA
TTAAGAAGAC CTCTAAAGTC ATCGGAAAAA GTTGAAAAAT TTTTTGAGAA GATAGAGATC
CAAATGAATG GAGATAGATA CTTTGGAGAT GATTTTAATA ATGTTAAAGA AAAAATTATC
TTGGAGGTGG AGAGATGA
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| Protein sequence | MINNQIFKGG VVLVKIDGNT LTIDDVHNVA RNKEDVTLDP EAKLRIEKSR ENIEKILKDE
KPVYGVNTGF GALVNVRISK EELAALQRNI VLSHAAGIGK SLEPDVIRAM MLLRANSLAK
GFSGVRPLVI EKLIEFLNKD VVPFVPEMGS VGASGDLAPL SHIAMALIGE GYIMSGNKKI
KTKQFLDSKG IKPLVLREKE GLSLLNGTQF MTSILSLLVR DMFKLIEVAT LVAAGAVDVL
LGTPKAYDER IQLARNHKGQ IYIAKLLRDY LSNSELRESH IDCGNVQDAY TLRTIPQVYG
AVYDILEFAK SVVENEINAA TDNPLIFDGE VISGGNFHGE PVALVCDYLS IALTDMGNMI
ERRIDRLVNP MVNRGLAPFL ATGKEGLNSG YMIWQYTAAA ICNENKVLSH PATSDTIPTS
AYQEDHVSMG ATAARKLKKI YSNLINLISI EAMLVKVALE LRRPLKSSEK VEKFFEKIEI
QMNGDRYFGD DFNNVKEKII LEVER
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