Gene Tmel_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1776 
Symbol 
ID5297941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1764394 
End bp1766388 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content36% 
IMG OID640770044 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001306996 
Protein GI150021642 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAC AGATAAAATT GATATTAATT CTTGTAATAG TAGCGGTAAT AGCAACGGTT 
GCGAGTATAT CTGTTTCATT GTATCTTTCA TTTGGTCATT TTTCACAAAT GGCAAGCACT
ATTAACGAAC TTGTTCTTAC TTCCATATCA AAAGACATAC AAGCTATTCT TAGCAATATT
ATTGAGTCCA TTTACAAATA TGCAACGGGG GGTTCTCTTG CTCCATACCT TATGAATGCA
ACTAGTGAAC TTGGAAAAAA ACAACTTGCT TGGGGTATTC GTAATGCTCG TAATGCTTTG
AAAAAGGATG GCTTTCTTTG GACTTATCTT GTTTTAGAAA ATGGTCAAAT ATTTGATGAA
ACCGGTGAAT TAAGTATTGA ATTTCCAGAC AAACTTGACG TATTGGTTCA TCAAATATTC
GATAAAGAAA AAGAATATGA CATATACATA CCATATATCT ATGAAGGTAC AAGCACAATA
GCGGTAGTAG TGCCGGTAAA GGATTTCAGT GAGAATGTAA CAGCAGTACT TATTGGGTTA
TATCCACAAG CAGTATTACA AGATTCGGTA GAGAATGCAA AGATAGGAGA GAATGGGATA
ATAAGCATAC TATATGATAC CATAGTGATA GCCCATCCAG ATAAAACAAA GGTAAACAAA
TTAGACGTAG CAAAAGAAAA AGAACTTGAA ACATTAAACT CTGCGCTATC AAAAGACAAA
GGGACGGTAA TATTCAAATA CAATGGAATG AAAAAATTTG CAAGTTTTGT AAAAATAGAC
GACTTACCAT TAAAAGTAAT GGCAACAATA AATTATGATG AAGTGATAAA AGAGGCGAAA
AAGATAGTAA ACTTAGGGAT ATTAACGGGG GTAATAGTAG CAATAGTAGC GGGAATAATA
GCATACTTTG TATCAAAATC AATAAGTAGA CCAATAATAG AGATAAGTGA AATAGCCAAG
AGAGTAGCGG AAAAAGACCT AACAGTAGAG ATAGAAGAAA AAGAAGGCAA AGATGAGATA
AGCCAACTAA CAAATGCGTT TAAGATATTG GTAGATAACT TCAAACAAAC AGTAGGAGAA
GTAATGAAAC TAAACTCACA AGTATACTCC GTTTCACAGT TATTAGATGA CATGGTGGAA
GAAGCGGAAA AAGCGGCGAA AGACGCAGAA GAAACGGTAA ACAAAGCGAC ATATGAGATA
CAAGAAGTAG TATCAGCCAC AGAAGAAGCA AACAGTGGAA TGGAAGAGAT AGCATCAGGG
GCGCAAAACA TAGCAAATTA CTCAGAAAAC CTAGCAAGGA AAGCGGAAGA GATGAGAGAA
AAAGCGACAG ATTCAACGGG AAGGGTAAAA GAGTTGAAGG GAGTAATAAT GGAAGTAGAC
GAAAAGATGA AAGAGACGGA AAAATCAGTA AGGGAGATGG AAGAATCATC GACAAAGATA
GAAGAAATAG TAGAAACGAT ATCAAGTATA GCGGAACAAA CAAACTTACT AGCACTAAAT
GCAGCGATAG AAGCGGCAAG GGCCGGAGAA GCAGGAAGGG GATTTGCGGT AGTAGCAGAT
GAGATAAGGA AATTAGCAGA AGAAAGTAAG AGCCAGACAC AAAAGATAGC AGAAGTATTA
AATGCGATAA AGAATCAAGC GGTAAACGTA GCAAAATACA CAGAAGAAGT GGGAGAAAAG
ATAGAAGAAT CCGTAGGGTC ATCAGAGAAA GTAAGTGAAG CAATAAGAGA GTTACTAGAA
AGGATAGAAG ATATATACGG AATGACAAAT GACTTAGCAG CGACATCGGA AGAACAGAGT
GGAGCATCAG AAGAGGTAAG CGCAGCGATA GATAGGGTAA CAAAGACATT GATGGAAGTA
GAAGAAGAAG TAAAACAAAT GGCAGGACAA GTGGAAAAAC AAGCAAAACA GGCTGCAGAG
GTAAAAACAT ATTCGGATGA CTTAAATGAT GCTGTCTCTT CATTGAACGA ATATTTGGCT
AAGTTTAAAT TGTAA
 
Protein sequence
MKLQIKLILI LVIVAVIATV ASISVSLYLS FGHFSQMAST INELVLTSIS KDIQAILSNI 
IESIYKYATG GSLAPYLMNA TSELGKKQLA WGIRNARNAL KKDGFLWTYL VLENGQIFDE
TGELSIEFPD KLDVLVHQIF DKEKEYDIYI PYIYEGTSTI AVVVPVKDFS ENVTAVLIGL
YPQAVLQDSV ENAKIGENGI ISILYDTIVI AHPDKTKVNK LDVAKEKELE TLNSALSKDK
GTVIFKYNGM KKFASFVKID DLPLKVMATI NYDEVIKEAK KIVNLGILTG VIVAIVAGII
AYFVSKSISR PIIEISEIAK RVAEKDLTVE IEEKEGKDEI SQLTNAFKIL VDNFKQTVGE
VMKLNSQVYS VSQLLDDMVE EAEKAAKDAE ETVNKATYEI QEVVSATEEA NSGMEEIASG
AQNIANYSEN LARKAEEMRE KATDSTGRVK ELKGVIMEVD EKMKETEKSV REMEESSTKI
EEIVETISSI AEQTNLLALN AAIEAARAGE AGRGFAVVAD EIRKLAEESK SQTQKIAEVL
NAIKNQAVNV AKYTEEVGEK IEESVGSSEK VSEAIRELLE RIEDIYGMTN DLAATSEEQS
GASEEVSAAI DRVTKTLMEV EEEVKQMAGQ VEKQAKQAAE VKTYSDDLND AVSSLNEYLA
KFKL