| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1767 |
|---|
| Symbol | |
|---|
| ID | 5297059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1754967 |
|---|
| End bp | 1755791 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640770039 |
|---|
| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_001306991 |
|---|
| Protein GI | 150021637 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGG ATAACCTAAC AAACTATTTG CGAATTGACC GCTGGCCCAC AGTATGGTGT
CCAGGTTGTG GTAATGGAAT AATAATGAAA TCTTTCATAC AAGCTGTCCA CGAGCTAAAT
CTTGAAAAAG ATAGGGTAGC GGTTGTATCG GGAATAGGTT GTTCATCAAG AGTAACTGGA
TATTTAGATT TTAACACCCT TCACACTTTA CATGGTAGAG CTATTGCCTT TGCAACTGGC
GTAAAACTTG CAAAACCGGA TTTCAAAGTA ATAGTTATGG GCGGGGATGG AGATATTACT
GCAATTGGTG GTAATCACTT TATACATGCA TGTAGAAGAA ATATTGACTT AACTGTCATA
ATATTCAATA ACATGATATA TGGAATGACA GGGGGGCAGC ATTCTCCAAC AACACCCCAG
AAAAAAATTG CAAGTACCAT GCCATATGGT AATATTGAAA ATTCCTTTGA TATAGTAAAT
TTAGCCCTCT CAACTGGTGC AACTTACGTT GCAAGAAGTA CCGTATATCA TTACCCCATG
ACCGTAAAAT TTATTAAAGA AGCTATCAAT CATAAAGGAA TGAGTGTTGT AGAAGTTTTG
ACAAATTGTC ACACATACTA CGGTAGATAT AATGGCATGA AAAATGCATG GGATATCCAC
AACTTTATGA AAGAAAATGC AATCCTAAAA TCAAAAGCGG ATAACATGGA TGAAAAAGAT
TTAAAAGATA AAATCATAAT TGGAGTATTT AAAAAAGAAG AAAAACCTGA TTTTTATTCA
AAATACAAAA AAGTCGTTGC AATTTCAAAA AATTCGGAGG TGTAA
|
|---|
| Protein sequence | MNRDNLTNYL RIDRWPTVWC PGCGNGIIMK SFIQAVHELN LEKDRVAVVS GIGCSSRVTG
YLDFNTLHTL HGRAIAFATG VKLAKPDFKV IVMGGDGDIT AIGGNHFIHA CRRNIDLTVI
IFNNMIYGMT GGQHSPTTPQ KKIASTMPYG NIENSFDIVN LALSTGATYV ARSTVYHYPM
TVKFIKEAIN HKGMSVVEVL TNCHTYYGRY NGMKNAWDIH NFMKENAILK SKADNMDEKD
LKDKIIIGVF KKEEKPDFYS KYKKVVAISK NSEV
|
|---|
| |