| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1741 |
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| Symbol | |
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| ID | 5296723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1731267 |
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| End bp | 1731821 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640770013 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_001306965 |
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| Protein GI | 150021611 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0277947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAGA AAAATGACAT AAAACACCTT GTAGTAATAT TTATCGTTTT TTTAGTGTTA
ACTACAGCAA TTTTTCAGCA GAAAGAGATT ATACAAAAAA GCGGAGAGAA AACCAGAAAA
TATGCGGAAC AGATAATAGA TATAAATTCC GCAACTTTTG AGCAACTTGT ATCATTGCCG
GGTATAGGTC CGACCAAAGC AAAAAGTATA ATTAATTATA GAGAAAAGGT AGGAGAATTT
TTATCTATTG ATGATTTATT AAATGTTTCA GGCATCGGGC CGTCTACATT GAAAAAAATA
AAACCATTTA TAAAAATCAA GACTGCAAAT GTTATTACAA ATAGTCCATC TGGAAGTGAA
GATGTAAAAA TAAATATTAA TAATGCCAGT GTTGAAGAGT TAATGAAACT TCCAGGTATT
GGCAAGGTTA AGGCTCAGGA AATAATAGAG TTCAGGAAAA AGTTTGGAAA TGTACAATCT
TTTGAAGATT TATTGAAAGT AAAGGGTATA GGCAAAAAAA CTTTAGAAAA AATAAAACCA
TTTATTGAAC TTTAG
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| Protein sequence | MVKKNDIKHL VVIFIVFLVL TTAIFQQKEI IQKSGEKTRK YAEQIIDINS ATFEQLVSLP
GIGPTKAKSI INYREKVGEF LSIDDLLNVS GIGPSTLKKI KPFIKIKTAN VITNSPSGSE
DVKININNAS VEELMKLPGI GKVKAQEIIE FRKKFGNVQS FEDLLKVKGI GKKTLEKIKP
FIEL
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