| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1621 |
|---|
| Symbol | |
|---|
| ID | 5297630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1610128 |
|---|
| End bp | 1610460 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640769898 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001306850 |
|---|
| Protein GI | 150021496 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAA CGAAAGTTGA ATTTATTAAT GATGAAAAAT ATTTAATTGC AAAAGTTTCT
GGAGATATCG ATGCTTATCA TTCAGCGGAT ATAAAGAAGG AAATACGTGA AAATATGATT
TCTTCAGATA AGGAAAAGGT TATAATTGAT CTTTCGGAAG TAAATTACAT AGACAGTGCA
GGTTTGGGAA GTTTAGTGGC TATATTAAAG GATGCGCGCA TGAATAATAA ATTATTATAT
TTAATGTCTC CTAAACAATC GGTTATGAGG GTTTTTGAAA TGACGAGATT AGATAAGGTT
TTCAATATTA TATCCAGTGT TGAAGAAATT TAG
|
|---|
| Protein sequence | MKGTKVEFIN DEKYLIAKVS GDIDAYHSAD IKKEIRENMI SSDKEKVIID LSEVNYIDSA
GLGSLVAILK DARMNNKLLY LMSPKQSVMR VFEMTRLDKV FNIISSVEEI
|
|---|
| |