| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1587 |
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| Symbol | |
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| ID | 5296958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1574926 |
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| End bp | 1575855 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640769864 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_001306816 |
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| Protein GI | 150021462 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR03151] putative enoyl-(acyl-carrier-protein) reductase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000431839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGAG TGTGTGAGCT TTTAAATATA AAGTATCCTA TTTTAATGGG GGGGATGTCA
TGGGCTGGAA CTGCAAAACT AGCGGCTGCA GTTTCAAATG CAGGAGGATT GGGTATAATA
GGTGCAGGAC CTATGAGAGC GCAAGATTTA AGAAAAGAGA TAGAGAAAAT AAGGTCATTA
ACTGATAAAC CTTTTGGTGT AAATATAATT TTAGTTTCGC CATTTACAGA TGAATTGGTA
AACGTTGTTT TAGAGGAAAA TGTGCCAGTA GTGACGTTTG GAGCGGGAAA TCCAACAAAA
TATATTAAAG ATTTGAAAGA AAAGGGAATA AAAGTAATAC CTGTAGTTGC ATCTGATAGT
TTGGCAAGAA TGGTGGAAAG AAGTGGTGCT GATGCAGTAA TAGCAGAGGG AATGGAATCA
GGTGGGCATA TTGGAGAGGT TACCACATTT GTCTTGGTAA ATGCTGTTTC AAAAAAGGTA
AAAATTCCTG TAATTGCAGC TGGTGGAATA TCTGATGGAA AAGGTATGGC AGCAGCTTTT
GCCTTAGGTG CGGAAGGGAT ACAAATGGGT ACTAGATTTA TCGCTTCAAA AGAAGCCCAA
GTACATGAAA ATTTTAAAAA ACTTATACTG AAGTCTGGAA TAAGGGATAC AGTAATTACC
GGTGCATCCT TAGGCCATTC CGCACGTGTG ATAAAAACAA AGTTTTCAAA ATTAGTGAAA
AATTTAGAAG TTTCAAGTCC GGTGGAAGCT GAAAATATCC TTGTAGGAAG TTTAAGAAAG
GCAGTGGTAT ATGGAAATGT CGATGAAGGT TCTTTTATGG CAGGCCAGTC AGTTGGATTG
ATAGATGAGA TAAAAACAGT TAAAGAGATA ATTGATGAAG TCATGGAAGA ATTTAAAAAG
GTTGTTTCTA ATTTAAAGGA GGGTTTTTAA
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| Protein sequence | MNRVCELLNI KYPILMGGMS WAGTAKLAAA VSNAGGLGII GAGPMRAQDL RKEIEKIRSL
TDKPFGVNII LVSPFTDELV NVVLEENVPV VTFGAGNPTK YIKDLKEKGI KVIPVVASDS
LARMVERSGA DAVIAEGMES GGHIGEVTTF VLVNAVSKKV KIPVIAAGGI SDGKGMAAAF
ALGAEGIQMG TRFIASKEAQ VHENFKKLIL KSGIRDTVIT GASLGHSARV IKTKFSKLVK
NLEVSSPVEA ENILVGSLRK AVVYGNVDEG SFMAGQSVGL IDEIKTVKEI IDEVMEEFKK
VVSNLKEGF
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