Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1572 |
Symbol | |
ID | 5296641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1559744 |
End bp | 1560700 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640769848 |
Product | electron transport complex, RnfABCDGE type, D subunit |
Protein accession | YP_001306801 |
Protein GI | 150021447 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.732649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTAA TTACAGGTAA TGCACCACAT TTAAGGTCTA ATGATACAAC TGAAAAAGTT ATGATTGATG TTATTATTGC GCTTATACCT GCAATAATTG GTGCGTGGTA CTTCTTCGGA GAATATGCCC TGTTTTTGAT TTTATTAGGA GCTTTTTCTG GTGAATTGTT TGAATTATTT GTAATGAAAG TTTTGAGAAA GGATAAAAAT TTTGTTCCAA ATGGAAGTGC TGCTATAACG GGGATTTTAC TTGCAATGAA TGTAAGTTCT GCAACACCTT GGTGGGTATT TTTAATTGGT TTGGTTTTTG CTTTAGGTGT TGCAAAACAT GCATTTGGTG GATTGGGAAT GAATATTTTT AATCCTGCAC TTGCAGGAAG GGCATTTTTA CTTGTATCAT TTCCCGTATC TATGACAACT TGGTATAAAC CTGTATTTTC TTTTTCAAAG TGGGTTGATA TTCAAACAAT GGCAACCCCG CTTGCTGTTT TAAAAGAAAC AGGAAGTGTT AATATAAGTT ATTGGGACTT GTTTATTGGT AATCGTGGAG GCTCTTTAGG AGAAACCAGT GTATTGTTGC TTTTAATAGG TTTTGCTTAT TTGGTTGTTA AAAAGAGAAT AAAGATTATG ATTCCAATTA CATATATTTC AACGGTTTTT GTAATGTCAG GCATTTTTTA TCTTGTTAAT TCATCTTTTG GAAGTCCTCT TTTCCACATT TTAAGTGGTG GTTTGATGCT CGGCGCTCTC TTTATGGCAA CTGATATGGT TACAAGCCCA ATGACGGTTA AAGGGCAGAT AATTTTTGGA ATAGGCCTTG GTGTTATGAC TTTACTTATT AGATATTTTG CAGGGTATCC CGAAGGAGTT TCTTTGTCTA TTCTTTTAAT GAATGCATTT GTTCCTCTAA TTGACAGATA CACTGTGCCG AAGGTATTTG GTGAGGTGAA AGCATGA
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Protein sequence | MKLITGNAPH LRSNDTTEKV MIDVIIALIP AIIGAWYFFG EYALFLILLG AFSGELFELF VMKVLRKDKN FVPNGSAAIT GILLAMNVSS ATPWWVFLIG LVFALGVAKH AFGGLGMNIF NPALAGRAFL LVSFPVSMTT WYKPVFSFSK WVDIQTMATP LAVLKETGSV NISYWDLFIG NRGGSLGETS VLLLLIGFAY LVVKKRIKIM IPITYISTVF VMSGIFYLVN SSFGSPLFHI LSGGLMLGAL FMATDMVTSP MTVKGQIIFG IGLGVMTLLI RYFAGYPEGV SLSILLMNAF VPLIDRYTVP KVFGEVKA
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