Gene Tmel_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1548 
Symbol 
ID5296737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1538403 
End bp1539305 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content29% 
IMG OID640769825 
Producthypothetical protein 
Protein accessionYP_001306778 
Protein GI150021424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.199847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTTTCGCTTT GTTACTTGTT GTATTTTCGG TAATTTCCTT TTCAGAAATT 
TCTATAAGTT TTGGGATATC TTTTGGGAAT TTAGAAGGTT TAAGTGACTA TTCTTTAGTT
ATAGTAACAG GAGAGTCTTT CATGGATGTG TATGTTGATG GAGAATATAT GGGTCAAACT
GATATTTTTG GGCAGTTTAT TGTAACTTTT GAGGAAAGTG GCTATCATTT TGTTGAAGTG
CAATCGGAAG ACTATATTGT TTTTTCAAGA ATGATTTTTA TTCGAAAAGA GGGGGTAGTT
TTAAAGTTAA AACCAATTAA AGCTGGTAGA ATAGTTGTAT TTTCAAATGT TTATCCAATA
AATGTGTATA TAGATGGAAT TTTTTGGGGA GAAATAAAGA ACGAGAATGA GGAGTTGAAG
CTACCCATTG GAGAATATAA AGTAATGTTT TCATCACCTG GATATGAAAA GTTAGAAAAA
GAATTAGTAA TAGATTTTAA AAGAGTAACA CCTGTTGAAC TTTTTTTAAA AAAGTTACCT
TTGGAGATGT ATTTAAGAAG CGATTATAAT GAATTTTCAC CGAATGGTGA TTGGTATAGA
GATAATTGGG AATTAGAGAT TTTGTTGACT ACTTTTTCAA CGGTTACAGT AGATATATAT
AAAGGGGATT TAAAAATTGA TAATTATGTT TTTTCAGGTG TTCCAGGTGT AAATTTGTTT
AAATGGAATG GTGTGAAAGA AGAAGGAGAT TACTTAGTAA AAGTTAGTGC ATATGATGAA
GATGAGATTG TAACAAAGAG TACTAATGTG AAAATAAATA TGAAATATAC GTATTTGAAA
GAGTTGGTTA TTATAAGTTT ACTATCCTTA GTTGGTGTTA TTGTATATTC AATTGTGAAA
TAG
 
Protein sequence
MKKIFALLLV VFSVISFSEI SISFGISFGN LEGLSDYSLV IVTGESFMDV YVDGEYMGQT 
DIFGQFIVTF EESGYHFVEV QSEDYIVFSR MIFIRKEGVV LKLKPIKAGR IVVFSNVYPI
NVYIDGIFWG EIKNENEELK LPIGEYKVMF SSPGYEKLEK ELVIDFKRVT PVELFLKKLP
LEMYLRSDYN EFSPNGDWYR DNWELEILLT TFSTVTVDIY KGDLKIDNYV FSGVPGVNLF
KWNGVKEEGD YLVKVSAYDE DEIVTKSTNV KINMKYTYLK ELVIISLLSL VGVIVYSIVK