| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1514 |
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| Symbol | |
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| ID | 5296869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1501168 |
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| End bp | 1502418 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769791 |
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| Product | NusB/RsmB/TIM44 |
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| Protein accession | YP_001306744 |
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| Protein GI | 150021390 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.164457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGTG ATTTAATAAT TGCCTATAGA CTGCTAAGAA AAAAATTCAG ATCGGGAATT
TTCTCAACGG AATTTTACCA AGCTTTCTCC TATGTGGAGG AGAAAGCTTT TTTTAAAAAC
CTAATTTTTG GAGTTTTAAG AAAGCAAGAA TACCTCGACT GGGTAATAAA TTCTCTTTTG
AAGAAAAAAG ATATTCCTCC ATCTATTAGA ACAATACTTA GAATAGGTAC ATACCAACTC
TTATTTACAA ACAAGCCTAG TTATTCAATT GTTAATGAAA CAGTTGAATT GGTTGAAAAA
AAATCATTTA AAGGACTAGT TAATGCCATT TTAAGAAAGA TATCAAAAAT TGGATATACT
GAACCTAAAG AATTATATTT AAAATATTCA CATCCAAAAT GGTTAATAGA ATATTGGAAA
AAATTTCTCC CCTTAGATTA CATATACAAA ATACTTGAAT ATAATCAATA TCCTTTAAAA
ACAACTGCAA GAGTTAACAA AAGAAAAATT GATAGAGATA AGCTAAAAAT TGAAAATATT
TTTCCAACTC CTCATTCGCC CGTGGGAATA TATTTTGAAA AAATTGAAGA AAATCCATGG
AAACTAGATA AATACATAAA TGGATACATC ACATACCAAA GCGAATCATC ACAAATAATT
CCTTTATTAG TTGATTTTGA AAAAGATGAA TTAGTTTTTG ATGCATGTGC TGCACCTGGA
GGCAAAGCCA CGCACATATT GGAACTTTGT GACGTTAATC TTGTTATTAA CGATGTTGAA
AAGCAAAAAA TAAAAATTCT TGAAAACCAA TTCAAACGAT TAAATCTAAG ACCAAAAAAA
ATATTAAATT TTGATGCGCA AAAAATAACC TTAAAAGACA AATTTGACAA AATATTCATA
GACGCTCCTT GCAGTAGCCT AGGCATTGCA CGAAGAAATC CCGAGGTATT AAGACGGCAA
AAAAAGGAAA ACTTTAAAAA ACTTTCAGAA ATACAAATAA ATATCATCTC AAATCTTTGG
AAATACCTAA AAAAACATGG GATAATGATA TATTCAACTT GCACAGTAAC TATCGAGGAA
AACACAAATA CCGTAAAAAA ATGGAAACCA TTTGCGGAAT TTGTAGATAT TAGGGAGAGA
TTGGAAAAAT TTGGAATAAA ATATGTCTGG GATGGTTATG GTACATTATT CTATCCTGAT
GAAATATTAA CACCGTTCTA CGTTTCAATA TTAAGAAAAA TAAAGGAGTG A
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| Protein sequence | MKSDLIIAYR LLRKKFRSGI FSTEFYQAFS YVEEKAFFKN LIFGVLRKQE YLDWVINSLL
KKKDIPPSIR TILRIGTYQL LFTNKPSYSI VNETVELVEK KSFKGLVNAI LRKISKIGYT
EPKELYLKYS HPKWLIEYWK KFLPLDYIYK ILEYNQYPLK TTARVNKRKI DRDKLKIENI
FPTPHSPVGI YFEKIEENPW KLDKYINGYI TYQSESSQII PLLVDFEKDE LVFDACAAPG
GKATHILELC DVNLVINDVE KQKIKILENQ FKRLNLRPKK ILNFDAQKIT LKDKFDKIFI
DAPCSSLGIA RRNPEVLRRQ KKENFKKLSE IQINIISNLW KYLKKHGIMI YSTCTVTIEE
NTNTVKKWKP FAEFVDIRER LEKFGIKYVW DGYGTLFYPD EILTPFYVSI LRKIKE
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