Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1490 |
Symbol | |
ID | 5297930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1476399 |
End bp | 1477283 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640769767 |
Product | PSP1 domain-containing protein |
Protein accession | YP_001306720 |
Protein GI | 150021366 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTAA TTGCTGAAGT ATACGGAGTG GAGTTAATAC CCATTGGTCC GATAATTTAT TACACTGACA ATGGGGAAGA TATAAAGGTT GGGGATAAAG TAGTTGTAAT GAGTGAGTTT GGATTAGATC ATGGGATTGT GAGAATAGGT AAGCGTCAAA TGAGTATTGA TGAGATTGGT TATGATTTAA AACCTATTTT CAGAAAGGCG ACGAATGAGG ATTTAGAGAA AATTAAGCAG AATAAAGAAA TAGAAAACAA GGCAATTGAG ACGACAAAAC AGCTGGTAAA AAAACATGGA TTAAACATGA AAATTCTTGA TGCAAGATTA ATGTTAGATG ACTCAAGATT GGTTATTTAT TTTAGTTCTA AGAATAGGGT GGATTTTAGA GAACTTGTAA AAGATATAGC AAAGGAGTTT AAAACGAGAA TTGAATTAAG ACAAGTTGGT GCAAGGGATG AAATGAAGTT TATTAAAGGA CTAGGATTAT GTGGTAAAAA GTCTTGTTGT TCATATTGGC TTAGAAGTTT TGATAGTATA ACTTTGAAAC ATGCAAAACG TCAACAAATG ATGATTAATA CAGCTAAAAT AACAGGTCCT TGTGGTAGAT TACTTTGTTG TTTAAAGTTC GAATATGATT TTTATATTGA TGCATTAAGA AATATACCTG ATGAAGGAAG TACGATTCTT TATGAAGGAA AGGAAGCGAA AGTGATTACA GTTAATGTAT TTTTATCAAG GGTGACGATA TATACAAAAG ATGGAGAAAC TATTGCTTTA CCATTTGAGT ATTTTAGGAG TGGTAAGGAT GTGGAAAGGA TTGATAATAA CGGGGATAAT TTTGGTAGTG ATGGGGATTT TGTGGATGAT TATGGAAAAG ATTAA
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Protein sequence | MGLIAEVYGV ELIPIGPIIY YTDNGEDIKV GDKVVVMSEF GLDHGIVRIG KRQMSIDEIG YDLKPIFRKA TNEDLEKIKQ NKEIENKAIE TTKQLVKKHG LNMKILDARL MLDDSRLVIY FSSKNRVDFR ELVKDIAKEF KTRIELRQVG ARDEMKFIKG LGLCGKKSCC SYWLRSFDSI TLKHAKRQQM MINTAKITGP CGRLLCCLKF EYDFYIDALR NIPDEGSTIL YEGKEAKVIT VNVFLSRVTI YTKDGETIAL PFEYFRSGKD VERIDNNGDN FGSDGDFVDD YGKD
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