Gene Tmel_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1490 
Symbol 
ID5297930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1476399 
End bp1477283 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content32% 
IMG OID640769767 
ProductPSP1 domain-containing protein 
Protein accessionYP_001306720 
Protein GI150021366 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTAA TTGCTGAAGT ATACGGAGTG GAGTTAATAC CCATTGGTCC GATAATTTAT 
TACACTGACA ATGGGGAAGA TATAAAGGTT GGGGATAAAG TAGTTGTAAT GAGTGAGTTT
GGATTAGATC ATGGGATTGT GAGAATAGGT AAGCGTCAAA TGAGTATTGA TGAGATTGGT
TATGATTTAA AACCTATTTT CAGAAAGGCG ACGAATGAGG ATTTAGAGAA AATTAAGCAG
AATAAAGAAA TAGAAAACAA GGCAATTGAG ACGACAAAAC AGCTGGTAAA AAAACATGGA
TTAAACATGA AAATTCTTGA TGCAAGATTA ATGTTAGATG ACTCAAGATT GGTTATTTAT
TTTAGTTCTA AGAATAGGGT GGATTTTAGA GAACTTGTAA AAGATATAGC AAAGGAGTTT
AAAACGAGAA TTGAATTAAG ACAAGTTGGT GCAAGGGATG AAATGAAGTT TATTAAAGGA
CTAGGATTAT GTGGTAAAAA GTCTTGTTGT TCATATTGGC TTAGAAGTTT TGATAGTATA
ACTTTGAAAC ATGCAAAACG TCAACAAATG ATGATTAATA CAGCTAAAAT AACAGGTCCT
TGTGGTAGAT TACTTTGTTG TTTAAAGTTC GAATATGATT TTTATATTGA TGCATTAAGA
AATATACCTG ATGAAGGAAG TACGATTCTT TATGAAGGAA AGGAAGCGAA AGTGATTACA
GTTAATGTAT TTTTATCAAG GGTGACGATA TATACAAAAG ATGGAGAAAC TATTGCTTTA
CCATTTGAGT ATTTTAGGAG TGGTAAGGAT GTGGAAAGGA TTGATAATAA CGGGGATAAT
TTTGGTAGTG ATGGGGATTT TGTGGATGAT TATGGAAAAG ATTAA
 
Protein sequence
MGLIAEVYGV ELIPIGPIIY YTDNGEDIKV GDKVVVMSEF GLDHGIVRIG KRQMSIDEIG 
YDLKPIFRKA TNEDLEKIKQ NKEIENKAIE TTKQLVKKHG LNMKILDARL MLDDSRLVIY
FSSKNRVDFR ELVKDIAKEF KTRIELRQVG ARDEMKFIKG LGLCGKKSCC SYWLRSFDSI
TLKHAKRQQM MINTAKITGP CGRLLCCLKF EYDFYIDALR NIPDEGSTIL YEGKEAKVIT
VNVFLSRVTI YTKDGETIAL PFEYFRSGKD VERIDNNGDN FGSDGDFVDD YGKD