Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1446 |
Symbol | |
ID | 5297782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1439689 |
End bp | 1442958 |
Gene Length | 3270 bp |
Protein Length | 1089 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640769725 |
Product | fibronectin, type III domain-containing protein |
Protein accession | YP_001306678 |
Protein GI | 150021324 |
COG category | [S] Function unknown |
COG ID | [COG4733] Phage-related protein, tail component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCCCAA AACTTAATGT GGATTCCAGC TACATTCCGT ATATACGCCA CCCAACACGC TACAAAAGTG TTGCAGTTTT CGCCAAAATC GACGGCACAA ACTGGTACGA CATCACCGAG TGGGTCAAGG AAGTCCGCAT CGTCAACAAA CTCGAATTTC TCGAAAGCCC CGCTATTGAC TCGGCCACGA TAATTCTCGC TAATCTCAGC AACGAATGGA CACCGACGCA GTATAACGAC GCATTCGATC CTTCAAGCGG CAAATTCAAC GGTACCGTAG ATCAGGCTTA CCTCAGCAAG GAATGGGAAG TCAAAATCCT GCTCCGTGTG TACAAGAGCG ATACCGAATA TATCGATGTC CCGCTCTTCT ACGGTGTCAA AACCCAGCTC ACAGAACGGC ACAAAGAAGC AGAAATGAAA GTGGCTGATA TATGCTACTA CGCAACGAAG AAAAAACTCG ATACAGACAT ACTTTACATC GATATGAAAC CGCACGAGAT ACTCGCTGAT CTCTTTCAGC GTGCAGGCCT CGACTCGTCG CAGTTTGACT TTCAGGAAGT CCAATATCCC TGCACATTTC TCGCAAGGAA AGACAGCACA ATTTGGCAAA CCGTGATAAA CCTCGTTCGC GGCACAGCAG GGAAGATATC CACAACACCC GAAGGCAAAA TCATATACAG AACAAGAATG GACACAAGTT CGTATTCCGA TCCCAACCCC GCACTCTCGC TTCAGCAGGA CACTTTCAAA CGCTACGATC TTGGAACCGA AAGACGGTTC AACAAGATCA CGCTTGAAAG CGAAGGATAC CGCGTCGATG ACGACCTGTC GTGGGTGATT GACTTTGAGC TTCAGGGCAA CAACACAATA GCCCCTGGAA CTACTGCGAC CTTTGAACTT GAGTATGTAT CAGACTACGC GGTGGCTGTG AGCGATACGA TATACATAAG CTATTCTGTC GGTGCGGGCT TTCAGGAGGA CGTGCCGTTC ACGGTCTTGG AGAGCACCCC ACAGCCTTCA AATGAGCATA TCCAGATCAC CAAGTACGAA AGATACGCCG ATAAAGCCGT TATCGAGATA AAAGCCCTTA CGACATCAGA AAACGTCGTA ATAAACCATG TGAAAATTCA GGGGCGGCAG GTCAAGAAGG TCAGTGTAAA CAAGCTGATC AAAGAAAACA CCACAGGCGA GCCCGACAAA GAATACAGCG TCAGAACCTT CTTTGACTCG CAAGCTGTGA TGAGCAATAT AGCCGATGTG CTGTACGAAA ACATCAACAA AACGATCCGC TTCGGTCTTG CGATGAACGA GTTCTACGCG GATGTGTATG CGGGAAATCT TATCGAATTC GCAGTACCGC TTAAAGGGAT TAGTTCAGGA ACATTCCTTG TTCTGAAGGT AGAGCACAGC CTGCAGTCTG CTAAGTTTCA GACATCGCTC GATATCGTCG AGTGGAAGGA TATCGAATTC ACGACAGGCG ATAAGACCTT CACCCGCGCT ACTCGCTCTC CTGACCCCGT CGAAAACCAA ACGCAGCAGC AAATCACTGA GGTTCAGGGA CAGATTCAAG AGCTTCAGGA GCAGGTGAAT GAGGTTGATG AGAGAACGAA CTATATTGAC AGTGCAGCAC CTTCTGTGCC GCAGAATTTG TCGCTTTCCA CAACTATGAA TGATAAAGGC GAAAGCGTAG TTAGAGTAAG CTTTGACCCT GTACCGGAAG CTGATGTAAT AGGGTATGAA GTAACTTGGA GTCTTGATGG TGTTCACTGG CACTATTATA CAACAGCAGA AACGCTGTCG CAGTTTGTGG TGCCCGGAAA CACCACCGTG TATGTAAAGG TGCGGGCTCT GGATGCGGAA GGAAAGAAGT CAGATTGGTC GAGCGCAGCT TCCATAACGA GCGCAAAAGA CGAGGTGCCG CCTGCTGTTC CAACAGGTTT AACACCGACG GGACTCTTTC AGACGATCAT GGTTAAGTGG AATCCAAACA CTGAAGATGA CTTCGACCAC TATGTCTTGC AGTACGACAC TAAGAGTGAT TTTTCAACAG CAAAAGAGAT AGTTTTGAAC GCTACATCGG CTGTTATAAA AGATTTGGCG GTTAATACGA CTTATTACCT GAGAATCAAA GCTGTTGATA AGTCTGGAAA TGCGAGCGAT TGGAGTTCTG CCGTGACGGC CTCAACGGTG AAGTTGGACG ATGCGAGTTA CTACGACTAT GCTGCAATTA AGGACGCTAT TATTCAAAAC GGAAAAATCG ATACAGCATG GATCAGCGAG CTTGATGCTG GTGTGATAAC GACCGGTTAC CTCGACGCTG ACCGCATCCA GGCCCGCAGC ATCACCCTCG ATAAACTCGC GGTGTCACCT GCGTTCTCAT TGCCCTCAGG CACCCTCGCC TACTGGACTA ACTCTCTCAT CGACGAAGCA AATCAGATAA TGCCTGAGGG ATATACGGAG GTTAATCTCG CCCCAAGGGT TACGCTTATT CCAGAAAATG CGCCTGAAGG TAGTGTTGTG GGTGATTTGA TTGCAGCAAA TACAATATAT GCAGGCAAAC GCATCGATGT GGGGACAGGA GTTAACCGAT GGGCGATTGA CGGTACTAAC GGGCTTGTTA GAGTTTTGAA TAATTCAGAT TACCCAGTTT TAGGAATTAT TTATGGGCCA TATTCAATAA ATATGAATGG AATTACAGAA CAAACAATAA CATTACCAGT TGCATTGACT GAGTATTTTG TCTTGCTTGG TATTAGTAAT TTTGAGTATT GGCGTTCTAC TTTCGCCCCA AATTATTCAA GAAAATTAAT ATTAGATTGG CAAAAAATTG ATAACCAAAG TTTTAAAATA TTAGCATATA CACAACTCGT GCAGCCAAAA CAATATCCAA ACGCTCAAGT CACAGTTGAA TACAATGACT CCACAGAAAC ATATTATACT TTGTATACAA TTACGGTTGC TGTAGATGAG GCTGTTGTGC GGATAAATGG CCCCGATCTT TCTGTTGAAT ATTTGCACCG TTACTCTGGA ACACCACCTT ATACGATTAA AGTGTCGTAT ACATGGGAGC TGAAAAAAAT TCTTCCAGAC GGCATTTATT TTGCCAAACT CGGTCATATT GATTGGGGTG ACGGAACAAT AACAGAGTGG GCATTGCGAG ATAGCCCTTC ATCATCTTCG AATGTTACAG CGACATTGGT AAGTTACACG CCGAGCACAC TAAAAGAATC AGCGAATGCC ATGATTACCT ATTCTGTAAT AGGATATTAA
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Protein sequence | MFPKLNVDSS YIPYIRHPTR YKSVAVFAKI DGTNWYDITE WVKEVRIVNK LEFLESPAID SATIILANLS NEWTPTQYND AFDPSSGKFN GTVDQAYLSK EWEVKILLRV YKSDTEYIDV PLFYGVKTQL TERHKEAEMK VADICYYATK KKLDTDILYI DMKPHEILAD LFQRAGLDSS QFDFQEVQYP CTFLARKDST IWQTVINLVR GTAGKISTTP EGKIIYRTRM DTSSYSDPNP ALSLQQDTFK RYDLGTERRF NKITLESEGY RVDDDLSWVI DFELQGNNTI APGTTATFEL EYVSDYAVAV SDTIYISYSV GAGFQEDVPF TVLESTPQPS NEHIQITKYE RYADKAVIEI KALTTSENVV INHVKIQGRQ VKKVSVNKLI KENTTGEPDK EYSVRTFFDS QAVMSNIADV LYENINKTIR FGLAMNEFYA DVYAGNLIEF AVPLKGISSG TFLVLKVEHS LQSAKFQTSL DIVEWKDIEF TTGDKTFTRA TRSPDPVENQ TQQQITEVQG QIQELQEQVN EVDERTNYID SAAPSVPQNL SLSTTMNDKG ESVVRVSFDP VPEADVIGYE VTWSLDGVHW HYYTTAETLS QFVVPGNTTV YVKVRALDAE GKKSDWSSAA SITSAKDEVP PAVPTGLTPT GLFQTIMVKW NPNTEDDFDH YVLQYDTKSD FSTAKEIVLN ATSAVIKDLA VNTTYYLRIK AVDKSGNASD WSSAVTASTV KLDDASYYDY AAIKDAIIQN GKIDTAWISE LDAGVITTGY LDADRIQARS ITLDKLAVSP AFSLPSGTLA YWTNSLIDEA NQIMPEGYTE VNLAPRVTLI PENAPEGSVV GDLIAANTIY AGKRIDVGTG VNRWAIDGTN GLVRVLNNSD YPVLGIIYGP YSINMNGITE QTITLPVALT EYFVLLGISN FEYWRSTFAP NYSRKLILDW QKIDNQSFKI LAYTQLVQPK QYPNAQVTVE YNDSTETYYT LYTITVAVDE AVVRINGPDL SVEYLHRYSG TPPYTIKVSY TWELKKILPD GIYFAKLGHI DWGDGTITEW ALRDSPSSSS NVTATLVSYT PSTLKESANA MITYSVIGY
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