Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1434 |
Symbol | |
ID | 5297214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1431405 |
End bp | 1432067 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640769710 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001306666 |
Protein GI | 150021312 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATATG TAACAAAAGT TCCAACACCA AAAGCTTTAA AGATTGGATT ACCAGGTATA ATTGAAATTA CAATGCTTAA AGAACTCGAA GGCACATATA AGACTTCAAT ATCAGATATT GACTTTAAAA AAAACCTAAT CTTTCTATCT ATTCCAACTT ACAAAGGACA TTTCATCCCA ATACCTAAAG GTACAAGAAT GAATGTAAAA TTTTTTGATA GAAGTTCGAT GTATACATTT TCTACTATAT CGCTTGGAGT AATTAAAAAA GATAATCTAT ACATGATCCC CGTGCCAGCA CCCGAATATG TAAATAAAAC TGAGAGAAGA AGATTTAAAA GAATTCCATT ATTTCTATTT GGAACGTTTA AATTATCCCC AAAAACTAAT GCTGAAGCTA TCCAGTTCAT GACCAAAGAC TTCAGTGCAG GAGGAATAAA AATTGTAACT GATGCAATTC TACATTTAGA TGATATAATA TATATAAATC TAAAATTAGA CGAAAATTTA CAGCTTGAAA ATCAAAAATC AAAGATAATT AGAGCTGATC AGAAAACAGA AGAAGGATTT CAATATGGTG TTGAGTTTTT AGATGTACCT ACAAATCTAG AAAACAAACT AGTAAGATTT GTATTTCAAA AAGAACTAAA AGCAAAGAAG TAG
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Protein sequence | MPYVTKVPTP KALKIGLPGI IEITMLKELE GTYKTSISDI DFKKNLIFLS IPTYKGHFIP IPKGTRMNVK FFDRSSMYTF STISLGVIKK DNLYMIPVPA PEYVNKTERR RFKRIPLFLF GTFKLSPKTN AEAIQFMTKD FSAGGIKIVT DAILHLDDII YINLKLDENL QLENQKSKII RADQKTEEGF QYGVEFLDVP TNLENKLVRF VFQKELKAKK
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