| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1425 |
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| Symbol | |
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| ID | 5296550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1423580 |
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| End bp | 1426159 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769701 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001306657 |
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| Protein GI | 150021303 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0517] FOG: CBS domain
[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG0618] Exopolyphosphatase-related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGTAG TTACTCCGCA TAAAGTTCCA GATTTTGATG GGTTTGCTGC CGCTTATGCC
TTTAAAAAAC TTAATCCAGA TTTTGAGATA GTAATTAGTG GGAGATTTCA ACAGAATTTG
GATGAGTTTT TACATCTTTT TGAGTTTGAA TATTTAAGTG AAAAAGAGAT AAAAAGTAAG
ATTAGTGATT TAGTAATCGT TGATACTGGA AATTTAGAAA GAATAGGTAA ACAAATTTTA
AAAAATGTTG ATGAAAACAC ACCAATAGAG GTTTACGATC ATCACCCATT TATTAAAAAA
CATGATGAAC AATTAAAGGT AAATCTTTTT GAATTAGGTT CGATAACAAC ATATTTTGTT
TTAAAAATAA AAGAAAAAAA TATTGATATT AATGAAGATG AAGCCACATT ATTTGCTATT
GCTATATATG AGGATACGGG AAATTTTTTG TACAGTACTA CTAAACCAGA AGATTTGGAG
GCAGCGAAAT TTTTGATAGA GAAAGGCGCA AAGCTAGATT ATATACAGGA ATTTACAAGT
TTAGAAATAA ATATGGAGCA GAAAAATTTA ATGCATATGC TTAGCGATAA TATAGAAATT
GTAAAGGTTG GAGATTTGGC TATTGCTATA GCAAAAACTG AAATTGAGAA GTTTATAGGT
GGTTTGAATA TAATTACGAC AAAACTATGG GAATTTGAAA ATTACGATAC ATTAATATCG
GTTGTAAGAA TGGGTAGAAA AGTATTTTTA GTTGCACGAA CCAAAAGTCA AGAAGTAAAT
ATTAAAAAGT TGATGGAAGG ATTTGGAGGA GGAGGTCATA TAAAGGCTGG TTCTGCAACC
TTAGAGAATG TTTCTGTAGA TGAAGTTGTT TATAAATTAA AGAATATGCT TCCAAAAGTG
GTAAAAAAAA TGGTTAAAGC AAAGGATATT ATGACTTCAC CTGTTAGAAC GGTTTTAGCA
TATGAAACCA TTGCCAAGGT TTATGAGCTT ATGAAATTAA CGGGACATGG TGGTTTTCCT
GTAATTGATG GGAATAAATT AGTGGGAATT GTGACGAGAA AAGCCGTGGA TAAAGCAATG
AGACATGGTT TTGAGGAAAG ACCTATTAAA TCTATTATGA ATACAAAATT AATAACTGTA
CATGAAAATG ACTCAATTTC AAAGGTGAAA AAAATTATGT TAGAAAACGA TATTGGTAGA
ATTCCGGTAC TTAATGAAAA TAATCTTTTA GTTGGAATAA TTACAAGAAC AGATTTATTA
AATGCAGATT TTAAAAATGT ATATGAAGAG GTTAGTGTTA ATTTCTTTGA AGATGTAAAA
CCGTTGCTAA TGAAAAATAT ACCTAACAGA TTTTTGAATT TGTTGAGACT TTTAGGGACT
TATGGAGATG ATTGTGATAT TCCTATATAT GTAGTTGGTG GATTTGTGAG AGATTTGTTT
TTGGGGATAG AAAATTTTGA TATTGACTTG GTTGTTGAAG GGAATGGAAT GGAATTTGCA
AAATATGTTG CAAAACAATT AGATGTAAAA GTGGTAGAAC ATGAGAAATT TCTAACTGCT
TCTTTGTTTT TTAAAGATGG TTTTAGAATA GATGTTGCAA CAGCTAGAAC AGAGTACTAC
GATAAGCCAG CGGAACTTCC CAAAGTAGAT ATAAGTACAA TAAAAAAGGA TTTGTATAGA
AGAGATTTTA CAATAAATGC AATGGCAATA AAGCTCAATT CTAAGGAATT TGGAATGTTA
TATGATTTTT TTGGTTCTCG TAAAGATTTA GAAGAAGGAA TTATACGAGT GCTTCATAAA
TTGAGTTTTG TTGAAGATCC AACTCGTATG GTAAGGGCAG TAAGGTTTGA GCAGAGATTT
GACTTTCGAA TAGAAGATGA AACATTGGAG ATATTAAAGG AAACTTTAGA AGGAGGATAT
TTAGAAAGAG TAACAGGTCA GCGAATTAGG CAGGAATTGG AAAAAATACT TCAAGAAAAA
GACCCTGTGA AAGGAATTAA AAGACTTTCC GAGTTAAATA TATTAAATCG TATATTTCCA
AAAACATATT TTACAGTACT AATGGAAAAA AAGTTAAAAA ATATGTTTTT GGTATTTAAA
AGGTTGAAAA ATATTTATTC TAAAAATAAT ATCTTTTACG CTGTTCTAAG AATATTTCTT
GAATTTTATG ATGTTGAAAC TTTGAAAAGT GTTATGCAAA GATATGGATT ACCAAAGAAA
TTTGTTGAGG AATTGAAAAA GATGGAAAAG AGGATAATAC CGGTTATTGA AATGATAAAA
ATGCGTATAA AATTTTCGGA TATTTATAAA ATACTTGGGA AACCTGTTTT TGAAACGGCA
GCTCATATAT TGGCGTATTT AGATGATGAA GATTCTAAAA ATTATTTTTT TGAATATTTA
GAAAGAGTAT TTACAGTTAA ATTAAATTTA AGTGGTAATG TTTTAAAGGA GAAGTTTAAA
ATAAAATCCA GTCCTGAAAT TGGAAAGATT ATGGGAGAAA TTTTTTGTAT GAAGCTTGAT
AATCCTTATA TAAACGAAAT GGAAAAGTTG AAAGAAATTT TGGGAGGGAG AAATGGATGA
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| Protein sequence | MKVVTPHKVP DFDGFAAAYA FKKLNPDFEI VISGRFQQNL DEFLHLFEFE YLSEKEIKSK
ISDLVIVDTG NLERIGKQIL KNVDENTPIE VYDHHPFIKK HDEQLKVNLF ELGSITTYFV
LKIKEKNIDI NEDEATLFAI AIYEDTGNFL YSTTKPEDLE AAKFLIEKGA KLDYIQEFTS
LEINMEQKNL MHMLSDNIEI VKVGDLAIAI AKTEIEKFIG GLNIITTKLW EFENYDTLIS
VVRMGRKVFL VARTKSQEVN IKKLMEGFGG GGHIKAGSAT LENVSVDEVV YKLKNMLPKV
VKKMVKAKDI MTSPVRTVLA YETIAKVYEL MKLTGHGGFP VIDGNKLVGI VTRKAVDKAM
RHGFEERPIK SIMNTKLITV HENDSISKVK KIMLENDIGR IPVLNENNLL VGIITRTDLL
NADFKNVYEE VSVNFFEDVK PLLMKNIPNR FLNLLRLLGT YGDDCDIPIY VVGGFVRDLF
LGIENFDIDL VVEGNGMEFA KYVAKQLDVK VVEHEKFLTA SLFFKDGFRI DVATARTEYY
DKPAELPKVD ISTIKKDLYR RDFTINAMAI KLNSKEFGML YDFFGSRKDL EEGIIRVLHK
LSFVEDPTRM VRAVRFEQRF DFRIEDETLE ILKETLEGGY LERVTGQRIR QELEKILQEK
DPVKGIKRLS ELNILNRIFP KTYFTVLMEK KLKNMFLVFK RLKNIYSKNN IFYAVLRIFL
EFYDVETLKS VMQRYGLPKK FVEELKKMEK RIIPVIEMIK MRIKFSDIYK ILGKPVFETA
AHILAYLDDE DSKNYFFEYL ERVFTVKLNL SGNVLKEKFK IKSSPEIGKI MGEIFCMKLD
NPYINEMEKL KEILGGRNG
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