Gene Tmel_1411 details

Gene Information

• Locus tag: Tmel_1411
• ID: 5298191
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 1413217
• End bp: 1413669
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 640769686
• Product: ferric uptake regulator family protein
• Protein accession: YP_001306643
• Protein GI: 150021289
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0735] Fe2+/Zn2+ uptake regulation proteins

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000449804
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATATTG AAACACTAAA AAAAGAATTA AAAAATAAAA AGTATAGAAT GACTCCACAA 
AGGGAATTAG TTTTAAAGGT ATTTATGGAT AACGAATCTA AACATTTAGG AGCAGAAGAT 
GTGTACAGAA TTCTCTTTTC AAATAAACAT ACCGTTAGCA AAGCAACTGT TTACAGAACA 
ATAGAACTTC TAGTAAGTTT CGGTCTTTTA AAGAAAATAG ACTTTGGCGA TGGCATATAT 
AGATATGAAT TAGCAAAAAA AGAAAAAATG CATCATCATT TTATTTGCAA CGTATGTGGG 
AAGATATATG AAATAGAAGA AAAACATCTT AACTTAATTA AAAAGGAATT AGCAGAAAAA 
GGGTTTCAAT TTGAAGATTT TGACTTCAAA ATATATGGAA TATGCCCAAA ATGTAGCAAA 
AAGACAAAGA AAAAAAGTTC TAGAAAAAAA TAA 

 

Protein sequence

MYIETLKKEL KNKKYRMTPQ RELVLKVFMD NESKHLGAED VYRILFSNKH TVSKATVYRT 
IELLVSFGLL KKIDFGDGIY RYELAKKEKM HHHFICNVCG KIYEIEEKHL NLIKKELAEK 
GFQFEDFDFK IYGICPKCSK KTKKKSSRKK