| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1402 |
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| Symbol | |
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| ID | 5298024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1404489 |
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| End bp | 1405340 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640769677 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001306634 |
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| Protein GI | 150021280 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.21791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA TAGGAGCCCA CATGCCAATT AGTGGAGGTT TTAAAAGAGT ACCAAAAGAA
ACACACGAAA TTGGCGGGAA TGCTTTTCAA ATTTTTCCAC ATAATCCAAG ACAATGGAAG
GCAAAACTTC CAAAAGATGA TGATGTGGAA ATATTCAAAA AAAGGGTAAA AGAATATAAT
TTAACAGAAG ACTCTATGCT CTGTCACAGC GGCTATCTTA TAAACATAGC AAGTCCCAAA
GAAGAAATCT GGCAAAAATC GCTTGAACTT CTAATTCTTG AAATGAATAT CTGCAAAACA
TTGGGAATAA GATATTTAAA TATACACCCT GGAAGCCATT TAAACAGTGG CGTGGAAAAG
GGAATAAATC AGATAGTAAA AGCTCTAAAT ATTGCTATGG AAAAAGAAAA AGAAACCTTT
ATTCTCTTGG AAAACGTAAC AAAAAAAGGT GGAAACATCG GTTCAACCTT AGAAGAATTA
AAAATGATAA TAGAAATGGT AAAATATCCA GAAAGGATAG GAATAACAAT AGATACTTGC
CATGCATTTG ATGCAGGATA TGATATAACC AATAAAGAAA AGCTGGATAA ATTTCTCAAA
ATGATTGACA AATTATTTTC ACTTGAAAAG TTAAAATTCA TTCATCTGAA TGATTCAAAA
AATGAACTGG GTTCAAATAA AGATAGACAT GAAAATATAG GAAAAGGAAA AATAGGAGTT
AAAGGTTTAA AAACATTCTT AACAAATGAA ACTATCCAAA AAATCCCATG GATTTTAGAA
ACCCCAGGAG ATAATGAGGT ACATAAAAAT GATATTAAAG AGGTATTTAA CATCTTAGGA
GTGAAACAAT GA
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| Protein sequence | MIKIGAHMPI SGGFKRVPKE THEIGGNAFQ IFPHNPRQWK AKLPKDDDVE IFKKRVKEYN
LTEDSMLCHS GYLINIASPK EEIWQKSLEL LILEMNICKT LGIRYLNIHP GSHLNSGVEK
GINQIVKALN IAMEKEKETF ILLENVTKKG GNIGSTLEEL KMIIEMVKYP ERIGITIDTC
HAFDAGYDIT NKEKLDKFLK MIDKLFSLEK LKFIHLNDSK NELGSNKDRH ENIGKGKIGV
KGLKTFLTNE TIQKIPWILE TPGDNEVHKN DIKEVFNILG VKQ
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