Gene Tmel_1377 details

Gene Information

• Locus tag: Tmel_1377
• Symbol: greA
• ID: 5298250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1379107
• End bp: 1379577
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640769650
• Product: transcription elongation factor GreA
• Protein accession: YP_001306609
• Protein GI: 150021255
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG AGGTAATTTA TTTGACAAAA GAAGGGTATG AAAAACTCAA AACTGAACTT 
GATAATTTAA AACAAAAACT TATGTTTGAA ATTGCAGAAA GGATAAAAGA AGCTAGAGAG 
TTAGGTGATT TATCTGAAAA TTCAGAGTAT CAAGAAGCAA AAAATGAACA AGGAAGAATT 
GCGGCGAGAA TTAATGAACT TGAAAACATG CTTTCTAAAG CAGAGGTTAT AGAAGGATTA 
GATACAAATG TAATAAATAT CGGAAATTGG GTAATAATAA AAAATTTGGA AACAGGTGAA 
GAAAAAACTA TTCAAATTGT CACACCACAT GAAGCAGATG TATTTAACAA TAAAATTAGC 
TTTGAATCGC CCATTGGAAG GATTTTGGTT GGGAAAAAAG TAGGAGAAGT GGTTAAAATA 
AAAGCACCCA AGGGTGTATT TAAATATCAA ATTTTGGGAA TAAAAGTTTA G 

 

Protein sequence

MKKEVIYLTK EGYEKLKTEL DNLKQKLMFE IAERIKEARE LGDLSENSEY QEAKNEQGRI 
AARINELENM LSKAEVIEGL DTNVINIGNW VIIKNLETGE EKTIQIVTPH EADVFNNKIS 
FESPIGRILV GKKVGEVVKI KAPKGVFKYQ ILGIKV