Gene Tmel_1376 details

Gene Information

• Locus tag: Tmel_1376
• Symbol: nrdR
• ID: 5298315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1378635
• End bp: 1379090
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640769649
• Product: transcriptional regulator NrdR
• Protein accession: YP_001306608
• Protein GI: 150021254
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATGTC CATACTGTGG ATATGAAGAA ACTAGGGTTT TAGATTCTAG AGTAGATTCT 
TCTGGTATGA CAGTTAGAAG AAGAAGGGAA TGTGTTAAAT GTAAAGGTAG ATTTACTACC 
TATGAGAGGT ATGAATTTGG GCCTGTGTTT GTTGTGAAAA AAGATGGAAA AAGAGAAAAA 
TTTGATAGGG CAAAAATTTT AAATGGTGTT ATGAAAGCTT GTGAGAAGAC AAATGTAACA 
TTGGAAGAAA TAGAAAAATT AGTGGACGAT GTTGTAAACG ATGTTCAAAA ATCTGGTAAC 
TTAGAAATAT TAACTTTAGA AATAGGAAAG CTTGTAATGG AAAAGTTAAA AAAATTAAAT 
GGTGTGGCTT ATGTAAGATT TGCATCGGTG TATAAAGATT TTAGAGAAAT TGATCAGTTT 
TTAGAAGTTG TTGAAGAATT AAAAAAAGAA AAATAA 

 

Protein sequence

MRCPYCGYEE TRVLDSRVDS SGMTVRRRRE CVKCKGRFTT YERYEFGPVF VVKKDGKREK 
FDRAKILNGV MKACEKTNVT LEEIEKLVDD VVNDVQKSGN LEILTLEIGK LVMEKLKKLN 
GVAYVRFASV YKDFREIDQF LEVVEELKKE K