Gene Tmel_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1365 
Symbol 
ID5297868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp1369920 
End bp1370534 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content31% 
IMG OID640769638 
Producturidine kinase 
Protein accessionYP_001306597 
Protein GI150021243 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.759935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTAA TTGGGATTGG TGGAGGAACT GGTTCTGGTA AAACAACAGT AGCTCAGAAG 
ATAAATGAGA TTATTGGGAA AGAAAATAGT GTTATTTTAC CTATGGATAA TTATTATAGG 
GATATGAGCT ACGTTCCGTT AGAAGAAAGG AAGAAATATA ATTATGACCA TCCTAATATG 
ATTGAGGTTT CACTTTTAGA AAAACATTTA AAAAATTTGT TAGAGTTAAA GAGTATAAAG 
TTACCAGAGT ATGATTTTAA GATTTATACA AGAACCGGGA AATTTACGAT TTTAGAACCA 
AGACCGGTTA TAATTGTGGA AGGAATTTTT GCTTTGTATT ATGAGGAATT GAGAAAGATG 
TATAATCTTT CGATATTTGT TGATGCCGAA AGTGATGTCA GGTTTATTAG AAGGCTTGAA 
AGAGATATTA AAGAAAGAGG TCGTTCTCTT GATAGTGTTG TGGAACAATA TTTGAATATG 
GTAAAACCAA TGCACGATGC TTACGTTGAA CCTTCGAAAA AATTTGCTGA TTTAATAATC 
CCAAAGGGCG GATTTAATGA TAAAGCTATT GATGTTGTTG TTGAATTTAT CTTTAAAAAA 
ATGACAAATA ACTGA
 
Protein sequence
MFVIGIGGGT GSGKTTVAQK INEIIGKENS VILPMDNYYR DMSYVPLEER KKYNYDHPNM 
IEVSLLEKHL KNLLELKSIK LPEYDFKIYT RTGKFTILEP RPVIIVEGIF ALYYEELRKM 
YNLSIFVDAE SDVRFIRRLE RDIKERGRSL DSVVEQYLNM VKPMHDAYVE PSKKFADLII 
PKGGFNDKAI DVVVEFIFKK MTNN