Gene Tmel_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1342 
Symbol 
ID5298332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1350131 
End bp1351030 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content30% 
IMG OID640769617 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_001306576 
Protein GI150021222 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.38743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTAA AAGTTAGTTT TAAAGTTGTT GTATATGTAT CTTTGTTAAT TTTTTCATTT 
TTAAATTTTT TCATAGCATT TTTAATCTTT TTTCTCTTGC AAATTCCTTT TTTGAGAAGG
TCTCTTTTGG GGAAACTTCC GTTTGATTTG GAGAAAAAGC CATGGTCTAG AAAAATAAGT
TATAAATACA AAGAAAATCT TTGGCTAGAT ATATATTATC CAAAAACTGA CTCAAACCAA
ATTATTTTGT TTGCACATGG TGGTGGTTGG ATTAGTGGAT ATAGAAGGCA ACCGAACAAC
ATTTCGTGGT ATAGATATTT GGTTTCAAAA GGATTTACGG TAGCGACTAT AGATTATAGA
TATGGATATT TAAACGATAT AGAACTATTA GTAGAGGATA TTTCCGATGC TTATAAATTT
GTGAGTGAAA AGTTTCCAAA ATTAAAAATA AGTTTAATGG GATTGTCTGC AGGCGGGCAT
CTTGCTTTAT ATTTTGTTTT AAAGTATAAG CCAAAAGTTG AAAATGTTGT AGCATATTAC
ACACCTTGCG ATCTTTTAGA TATTTGGAAA AGCCCATCAT TATTTGCAAA ATTTGCCGTT
TCGACAACCT TGAAAAGATT GCCAAATAAA TCAAAAGATT TATACATTAA ATACTCTCCA
ATTTCATATG TGGATAAGAA CCTTCCACCA ATTTTGTTAG TACATGGTTT AAAGGATAAG
GTAGTGCCAT TTATTTCTTC TGTTAGGATG TATAAGAAAT TAAGAAAAAT GGGGAATAAA
GCAAAGTTGT TACTACATCC CAAAGGTGAT CATGGATTTG AATTTGTCTT AAAAGATGAT
AAGACAAGGG AAATACTTGA AAAAACAATA AAATTTTTAA GGGGAGATTT ATATGATTAG
 
Protein sequence
MNLKVSFKVV VYVSLLIFSF LNFFIAFLIF FLLQIPFLRR SLLGKLPFDL EKKPWSRKIS 
YKYKENLWLD IYYPKTDSNQ IILFAHGGGW ISGYRRQPNN ISWYRYLVSK GFTVATIDYR
YGYLNDIELL VEDISDAYKF VSEKFPKLKI SLMGLSAGGH LALYFVLKYK PKVENVVAYY
TPCDLLDIWK SPSLFAKFAV STTLKRLPNK SKDLYIKYSP ISYVDKNLPP ILLVHGLKDK
VVPFISSVRM YKKLRKMGNK AKLLLHPKGD HGFEFVLKDD KTREILEKTI KFLRGDLYD