Gene Tmel_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1337 
Symbol 
ID5297816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1345304 
End bp1345978 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content33% 
IMG OID640769612 
Producthypothetical protein 
Protein accessionYP_001306571 
Protein GI150021217 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.983597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA ACGTTAATTT CAAAGGTTCC TACTCAATAC TCTTTGTAGA TCTTGAACCC 
GGAGAAATTA TAATAGGTGA ACCTGGCGCA ATGGTTACAA TGTCAGGAGA TTTAGAAATC 
GAAACCTCTA CTGGGGGAGT ATTCAAAGCC TTAAAGCGAG CATTTCTAGG TGGTGAACAC 
ATATTTTTAA ATAAATATAA AGCAAAAAAT AAAAGTAGAA TATCTTTTGC CCCAAAATTA 
CCCGGTGATA TCGATATAAT AGATTTAAAT GGAACAGTAT ATTTGCAATC AACTTCTTTT 
CTTGCATCAG AAGAAGGTAT AAATTTAGAC ACAAAATTTA CCGGATTTAA ATCGTTTTTC 
TCAGGGGAAG GCTTTTTCTT GCTTAAACTT TCTGGATATG GAAAACTCGC TATTTCATCC 
TTTGGAGCAA TATTTAGTTT AGAGCTAAAA GAAGATGAAA AAATAACAAT AGACACAGGT 
CATGTAGTGG CATTTGACGA ATCAGTGAAT TATTCAGTTA GAACTTTTGG CGGATTTAAA 
TCTACCATTT TCGGTGGAGA AGGATTAGTA GTAGATTTCA TCGGTCCTGG AAAAATATAT 
ATTCAAACGA GAAATTACCC TGAGTATATA AAATGGATAA AAAGCTTATC ACCAAAAGAC 
ACTGGAAGTA GATAA
 
Protein sequence
MNFNVNFKGS YSILFVDLEP GEIIIGEPGA MVTMSGDLEI ETSTGGVFKA LKRAFLGGEH 
IFLNKYKAKN KSRISFAPKL PGDIDIIDLN GTVYLQSTSF LASEEGINLD TKFTGFKSFF 
SGEGFFLLKL SGYGKLAISS FGAIFSLELK EDEKITIDTG HVVAFDESVN YSVRTFGGFK 
STIFGGEGLV VDFIGPGKIY IQTRNYPEYI KWIKSLSPKD TGSR