Gene Tmel_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1334 
Symbol 
ID5297748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1342361 
End bp1343086 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content33% 
IMG OID640769609 
ProductWecB/TagA/CpsF family glycosyl transferase 
Protein accessionYP_001306568 
Protein GI150021214 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.01656e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGACG TGGAAGTAGT AAATTTCTCG CAGTTGAGAT TAACTATTGG AAGTGAAGAA 
GAAGTAAGAA AAAAGATAGT TGAAGATGTT AATAACGGTG TAAAAACATT TGTAGTTACT
TTAAATGCGT CTATTCTTTT ACGTACATTA AAGGATAGTT ATTATAGAAA AATTGTTGAG
GAAGCTAATT ATATTATTCC AGATGGTTCT GGTATAGTTT GGGCGTTAAA AAGGAATAGG
AAAATATTGA CGGACAGAAT TACCGGTATA GATACAATGC TTTATCTGTG TGAAAAGGCG
AAAATATATG GTTGGAAAGT ATATTTACTT GGAGCCAAAA GGAAGGTTGT AGAAAAGGCT
GCCAGAAAAT TAAAAAAAAG AGGTATAAAT GTTGTAGGGT ATTATCATGG GTATTTTTCA
AAAAGTGATA CTACTCCCAT TGAAGAAATA GAGTCTTTAA AACCAGATCT TTTATTTGTT
GGCATGGGAG TTCCTAAGCA AGAAGAATGG ATATACGAAA ATTTTTCTTT GCCCTTTAAG
TTGGCTATGG GTGTAGGTGG GAGTTTTGAT GTTATTTCAG GTAGTAAAAA GAGGGCTCCT
GTATTTTTTC AACGGATGAA ACTTGAGTGG TTTTACAGAT GGTTGCAATC CCCGATAAAA
AAAAGGCATA TTCCCATTGA AATTGTAAAA TATACATTTA TGGTTTTAAG AGGAAAGATA
AGATGA
 
Protein sequence
MEDVEVVNFS QLRLTIGSEE EVRKKIVEDV NNGVKTFVVT LNASILLRTL KDSYYRKIVE 
EANYIIPDGS GIVWALKRNR KILTDRITGI DTMLYLCEKA KIYGWKVYLL GAKRKVVEKA
ARKLKKRGIN VVGYYHGYFS KSDTTPIEEI ESLKPDLLFV GMGVPKQEEW IYENFSLPFK
LAMGVGGSFD VISGSKKRAP VFFQRMKLEW FYRWLQSPIK KRHIPIEIVK YTFMVLRGKI
R