| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1330 |
|---|
| Symbol | |
|---|
| ID | 5297694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1338409 |
|---|
| End bp | 1339323 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640769604 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_001306564 |
|---|
| Protein GI | 150021210 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.373996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATATTT TATTTTTGAT TTTCATATTC TTTTTGTTTA TATTGGCTTC ATCTGGAATA
AGGATAGTTA GGCCTTATGA AAGAGGTTTA GTGGAAAGAT TGGGGAAGTT TAAAAAAGAA
GTAAAAGCGG GAATCCATTT TATTGTCCCA TTTTTTGATA AAATGATCAA AGTAGATTTG
AGAGAACATG TCATAGATGT TCCACCGCAA GAGGTAATTA CAAAAGATAA CGTTGTTGTT
ACAGTAGATG CTGTTATTTA TTATGAAATT ACAGACGCAT ACAAGGCAGT ATATAACGTC
AGTAATTTCG AATTTGCAAC TGTAAAACTT GCACAAACTA ACCTGAGAAA CGTGATAGGT
GAATTAGAAC TTGACCAGAC GTTGACATCC AGGGAGGAGA TAAATACAAA ATTGAGGACA
GTTCTCGATG AAGCTACTGA CAAATGGGGA ATTCGTATTA CAAGAGTGGA AATTAAAAAG
ATAGATCCAC CTAAGGATAT AATGGAAGCT ATGAGTAAGC AAATGAAGGC AGAAAGAACC
AAAAGAGCTG CAATTCTTGA AGCAGAAGGT ATAAGGCAAT CGGAGATTTT GAAGGCGGAA
GGTCAAAAAC AAGCAGCCAT ATTAAAGGCG GAAGGTGAGG CAGAAGCTAT TAAAAAGGTT
GCAGAGGCTA ATAAATATAA ATTAATTGCA GAAGCGCAAG GACAAGGAGA AGCTATTATG
TATATCTTTA AATCTATCCA TGAGGGGAAT CCAACAAATG ATGTTATTGC AGTGAGATAC
CTTGAAACAT TGAAGGAAAT GGCAAATGGA AATGCGACGA AAATTTTCTT GCCTATGGAA
GTTTCTGGGA TTTTAGGAAG TATTGGGGCC ATTTCTGAGA TGTTCAAAAA TGGCGGTGAG
GGAAATAATG ATTAA
|
|---|
| Protein sequence | MYILFLIFIF FLFILASSGI RIVRPYERGL VERLGKFKKE VKAGIHFIVP FFDKMIKVDL
REHVIDVPPQ EVITKDNVVV TVDAVIYYEI TDAYKAVYNV SNFEFATVKL AQTNLRNVIG
ELELDQTLTS REEINTKLRT VLDEATDKWG IRITRVEIKK IDPPKDIMEA MSKQMKAERT
KRAAILEAEG IRQSEILKAE GQKQAAILKA EGEAEAIKKV AEANKYKLIA EAQGQGEAIM
YIFKSIHEGN PTNDVIAVRY LETLKEMANG NATKIFLPME VSGILGSIGA ISEMFKNGGE
GNND
|
|---|
| |