Gene Tmel_1327 details

Gene Information

• Locus tag: Tmel_1327
• Symbol: thrS
• ID: 5296902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1335251
• End bp: 1337161
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640769601
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001306561
• Protein GI: 150021207
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0393085
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAA AATTTCCCGA TGGTAATGTT AAAGAATTTG AAAAGGGAAT TACTCCTGGT 
GAGATAGCGA AAAGTATAAG TGAGGGGTTA TATAGAAATG CAGTTGGAGC AATTGTTGAT 
AATATATTGT GGGATTTAAA CAGACCTATT AATTTTGATT GTAGTTTGAA AATAGTTACG 
AAAAAAGATA AAGAGGCACC AGAATTTTTC AGGCATACTA TGGCGCATAT TTTAGCTCAA 
GCTGTTATGA GAATTTATGG AGAAGAGAAC GTAAGGTTAG GCATAGGTCC CACAATCGAA 
AATGGTTTTT ACTATGATTT TGAAATTTTG AATGGAACTA TAAAGGAAGA GGATTTGGAA 
AATATAGAAA AAGAGATGAA AAAGATTATA AAGGAAGATT TACCAATTGA AAGATTTGAG 
CTTCCAAAAG ATGAAGCAAT TGATATGATG AATAAAAAAG GGCAGATATA TAAGGTGGAG 
TTAATAAATG AGATAAATGA TGAAAAAGTT AGCTTTTACA AACAAGGTGA ATTTGTAGAT 
TTATGTAGAG GGCCACATCT TCCAAGAACA GGAATGATAA AACATTTTAA ATTGCTTTCG 
GCATCGGGAG CTTATTGGAG AGGTAGCGAA AAAAATCCCA TGCTCCAGAG AATTTACGGA 
ACTGCATTTG CAACCAAAGA GGAATTGGAA AATTATTTGA AGATGTTAGA GGAAGCAAAA 
AAGAGAGATC ATAGAAAATT AGGACCAAAA TTGGGATTAT TTTTCATAAA TACAGATGTT 
GCTGCGGGCA TGCCTATTTT CTTACCAAAA GGAACAATTA TTTTGAATGA GCTAATGGCT 
TTTTCAAGAA GTCTTCACGA AGAATATGGA TATACAGAAG TGATGACACC GTTGGTAATG 
AATGTAAAGT TATGGTATCA GAGTGGGCAC TGGGATCACT ACAAGGAGAA TATGTATTTT 
ACTGAAAAAG AAGAAGTGGA ATATGCTATA AAGCCTATGA ATTGTCCAGG ACATATTTTG 
ATATACAAAA ACAACGTAGT TTCATATAGA GATTTACCCA TTAGATTGTT TGAATTTGGA 
AAAGTTCATA GATATGAGAG AAGTGGAGTT TTACATGGAC TTTTAAGGGT AAGGGCGTTC 
ACTCAAGATG ATGCCCATAT TTTTTGTAGA CAGGATCAAA TAGAAGAAGA AGTAAGTAAA 
GTGGTAAAAC TTATTGATCA GTTATATAAA CCATTTGGAT TTTCATATAG AGCTACACTT 
AGTACAATGC CAGAAGATCA CATGGGTGAT GAAGAAACTT GGGAAAAAGC AACCAATGCT 
CTAAGAAAAG TATTGGAAGA CATTAAACTC GAATTTGAAG TGGCAGAAGG AGAAGGGGCA 
TTCTATGGGC CAAAGGTTGA TTTTCATGTA AGAGATTCTT TAGGAAGAGA GTGGCAATGT 
GCAACTATTC AACTTGATTT CCAAATGCCA GAGAGATTTG AATTGACTTA TGTTGATAAA 
GATGGAATTG AAAAAAGACC GGTAATGATT CATACTGCAA AGTACGGCTC ACTTGAGAGA 
TTTTTCGGAA TACTTATTGA GCATTTTGCC GGAGCATTTC CACTTTGGCT TTCTCCAATT 
CAGGTTGTTG TGTTACCTGT TTCAGATAAA TATGTATCTT ATGCAAGAAA GATATACAGT 
ATTCTTATGG AAAATGGTGT AAGGGTATCG GTTGATGATA GAAATGAAAC GTTGGGGTAT 
AAAATTCGTG AGGCTCAAAT AAACAAGATA CCATATATGA TAATAGTTGG GGAAAGAGAA 
GAAGAAAGTG GTAAAATAAG TATTAGAAGT AGGGATGGTG TAGAGCAAAA AGATATAGCT 
GTTGAAGAAT TTTTAGACCT ATTGAGCGTG TCTATAAAGG AAAGAAGGTG A 

 

Protein sequence

MKIKFPDGNV KEFEKGITPG EIAKSISEGL YRNAVGAIVD NILWDLNRPI NFDCSLKIVT 
KKDKEAPEFF RHTMAHILAQ AVMRIYGEEN VRLGIGPTIE NGFYYDFEIL NGTIKEEDLE 
NIEKEMKKII KEDLPIERFE LPKDEAIDMM NKKGQIYKVE LINEINDEKV SFYKQGEFVD 
LCRGPHLPRT GMIKHFKLLS ASGAYWRGSE KNPMLQRIYG TAFATKEELE NYLKMLEEAK 
KRDHRKLGPK LGLFFINTDV AAGMPIFLPK GTIILNELMA FSRSLHEEYG YTEVMTPLVM 
NVKLWYQSGH WDHYKENMYF TEKEEVEYAI KPMNCPGHIL IYKNNVVSYR DLPIRLFEFG 
KVHRYERSGV LHGLLRVRAF TQDDAHIFCR QDQIEEEVSK VVKLIDQLYK PFGFSYRATL 
STMPEDHMGD EETWEKATNA LRKVLEDIKL EFEVAEGEGA FYGPKVDFHV RDSLGREWQC 
ATIQLDFQMP ERFELTYVDK DGIEKRPVMI HTAKYGSLER FFGILIEHFA GAFPLWLSPI 
QVVVLPVSDK YVSYARKIYS ILMENGVRVS VDDRNETLGY KIREAQINKI PYMIIVGERE 
EESGKISIRS RDGVEQKDIA VEEFLDLLSV SIKERR