Gene Tmel_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1313 
Symbol 
ID5297328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1321427 
End bp1321834 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content26% 
IMG OID640769587 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001306547 
Protein GI150021193 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTA TTTCATTAAC ATTTTTATCG AAAAGTGAAA ACATAAAAAT AGCCCGAAGC 
ATTATACAAA ACTTTTTATC TCAAAAAAAC TTAAATGAAC AAGATATTTT TGACACAGAA
CTTGCCGTTA ACGAAGCAAT AGCTAACGTT ATAGAACATA CATATAATTT TGAAAAAGAT
AAAATAATAA AGATGACGTT AAAATGGATT GAACCAAATA CTCTAGAGGT ATATTTAAGA
GATTTTGGTC CAAAGGTTGA TCCCAGTAAT GTAAAACCTA GAAAGTTAGA AGAAATAAGA
CCTGGTGGGT TAGGTGTATA TATAATAAAA AAAGTTTTTA ATGTTATGGA ATTTAGGAAT
GTAGAAAATG GTAATTTATT ATTCTTATCA AAAGAATACG AAATTTAG
 
Protein sequence
MDFISLTFLS KSENIKIARS IIQNFLSQKN LNEQDIFDTE LAVNEAIANV IEHTYNFEKD 
KIIKMTLKWI EPNTLEVYLR DFGPKVDPSN VKPRKLEEIR PGGLGVYIIK KVFNVMEFRN
VENGNLLFLS KEYEI