Gene Tmel_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1292 
Symbol 
ID5297832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp1303234 
End bp1303899 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content33% 
IMG OID640769566 
Productflagellar hook capping protein 
Protein accessionYP_001306526 
Protein GI150021172 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATT GGATACAGAT GAATAGTATT TATCCTACAA ATGTTACAAG GGAAAATGGT 
ATAAAAAAAG AATTGGATAA AGAGGCATTT TTGGAATTGC TTGTTACTCA GTTGAAAAAT 
CAAGATCCCC TTGAACCATT AAAAGATAGG GAATTTATCG CTCAAATGAC TCAGTTATCG 
ACTTTGGAAC AGATAACAAA CATGAGTGAA TCTGTTCAGA AGTTTGTTGA AAGTTCTGCT 
TCGTTGTATA GAGCACAAGT TTCATCAATG GTGGGAAAAT ATGCGGTTGT AAAATCAAAT 
ATACTTGAGT TAAAAAATGG AAATGCAAGT ACACAGGTTT TTAAATTGGA AGAGCCTTCG 
CATGTGATTT TAAAAATCTA TGATGAAAAT GGAAAATTGG TAAAAGAAGA AGACCTTGGA 
AATTTAAATG CGGGGATGCA AACATTTTTA TGGGATGGAA GGAATAAAGA TGGTGTTAAA 
TTACCAGATG GAAATTATAC TTTTAATCTC TATTCAGTTG AAAGAGATGG AAGTTTGACT 
GAGATATCTG CTATGGATGG TGGAAAAGTA GAGGCTGTAC AATTTAGAGA TAACGATGTT 
TATGTGCTTG TAAATGGCAA TTTATATCCC ATAAGTTCAA TAATAGAAAT TTCGGAAGAG 
GGGTGA
 
Protein sequence
MMNWIQMNSI YPTNVTRENG IKKELDKEAF LELLVTQLKN QDPLEPLKDR EFIAQMTQLS 
TLEQITNMSE SVQKFVESSA SLYRAQVSSM VGKYAVVKSN ILELKNGNAS TQVFKLEEPS 
HVILKIYDEN GKLVKEEDLG NLNAGMQTFL WDGRNKDGVK LPDGNYTFNL YSVERDGSLT 
EISAMDGGKV EAVQFRDNDV YVLVNGNLYP ISSIIEISEE G