| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1281 |
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| Symbol | alaS |
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| ID | 5297172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1289256 |
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| End bp | 1291835 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769555 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001306515 |
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| Protein GI | 150021161 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAGTG AAGAGATAAG GCAATTGTTT TTAGAGTTTT TTGAAAAAAA GGGCCATAAA
ATTTTACCAA GTGCGTCTTT AATTCCCGAT GATCCTCAGT TAATGTTTAC AGTTGCTGGT
ATGGTTCCGT TTAAACCCAT CTTTTGGGGA AAAGTAGATC CTGTGTACCC AAGAGTTACA
ACTTGCCAAA AATGTATTAG GACTACTGAC ATAGAAAACG TTGGTAGAAC ACCAAGACAC
CATACATTCT TTGAAATGCT TGGAAATTTT TCTTTTGGTG ATTATTTTAA AAGAGAAGCA
ATTGAATGGG CTTGGGAATT TGTTACGCAA GTTTTAAAAA TCCCAGAAGA AAGGTTATGG
ATATCTGTTT ACGAAGAAGA TGAAGAAGCC TATGATATTT GGAGAAAAAT AGGTGTTTCA
TCAAATAAAA TAGTTAAATT GGGAAAAGAA GATAATTTTT GGGGGCCTGC TGGACCTACG
GGGCCTTGTG GTCCTGATAC GGAGATTTTT TACGATACAG GTAAAGAAGT TCCTATAACT
GATGGTAAGG AACCAAATCC TGGTAATACT GAAGGAAGGT TTGTCGAAAT TTGGAATTTG
GTGTTTACTG AATACTACCA GGATGAAAAC GGTCAATTGT TACCTTTAAA GAGGAAAAAC
ATCGATACAG GTGCTGGATT AGAAAGAATA GCTGCTATGA TGCAAGGAGT ATATTACAAC
TTTGACACAG ATCTTTTTTT GCCAATCATT AATAGAATTA CAGACGTGTT AAATGTTGAA
TATGGAAGAG ATGAAAAGCA TGATGTGTCT ATACGGGTTA TAGCTGATCA TATAAGAGCT
TTGGTGTTTT TGATATCTGA TGGTGTATTT CCTTCAAATG AAGGAAGGGG TTACATTTTA
AGGAGAATTT TGAGAAGAGC AGCAAGACAT GGAAAAATGC TTGGGTCTGA GAAACCGTTT
TTGCATAATA TAGTTGATGC TGTGGTTGAG AAAATGGGAA AAATTTATCC TGAGATAGTA
GAGAAACAAT CTTTTGTAAA GGAAATAATT TACGGTGAAG AAGAAAGATT TTTGCAGAAT
TTAAACAAGG GCCTTGATAT AGTAGATAAG ATTGTTAAAG AAACAGGTGG GAAGATAGAT
GGGGAAGCTG CTTTTAAACT TTACGATACT TATGGTTTTC CACTTGATAT ATTGAGGGAT
CTTGCGAATG AAAATGGTTA TATTTTGGAT GAAGAAGGTT TTAATAAATA TATGGAACAA
CAAAGAAAAA AGGCTAGAGA AGCTGCAGGA GAAGTTGAAT TTTCAGAAAG AACAGATTAT
GAAACATTGG ATATTAGTAC AAAGTTTGTT GGTTATGATG TGCTTAGTAC AAATGCAAGG
GTTTTGAAAA TAAGAACGGA GAAATTTGTT GATGAAGTAA AAGATGTGGA GTGTGAATTA
ATTTTAGATG AAACACCATT TTATCCAGAA AAAGGCGGTC AAGTTGCAGA CAAAGGTGTT
ATTAAAGGCA AAAATGGAGA GTTTGTTGTA ACAAATGTTT ATGTTCCCGT TGAGGGGATA
ATTGTTCATA AGGGGAAATT GAAAGGAAAA ATAAGAGTTG GTGATGCAAT TTTTGCATCA
GTAGATGAGA AAAAAAGAAA AGCAACTGCA AGAAATCATA CTGCTACTCA TTTACTACAT
GCAGCACTAA GAAAAGTTCT TGGAACACAT GTAAGACAAG CAGGTTCTTT AGTTGCGCCT
GAAAGATTGA GATTTGATTT TACTCATTAT GCGGCTTTAA CAAAAGAAGA AATTGAAAAG
ATAGAGAAAA TGGTTAATGA AAAAATTTTA GAAGCTATAG ATGTGAATAC AAAAGTTATG
TCTTATGATG AGGCAATAAA AAATGGTGCA ATGGCTTTAT TTGAGGAGAA ATATGGTGAT
AAAGTAAGAG TTGTAAGGAT AAGAGATTTT AGTGAGGAGT TGTGTGGAGG AACACATGTG
AAAAATACAG GTGAGATTGG TTTATTTAAA ATAATAAGTG AAAGTTCTGT GAGTGCCGGT
GTAAGGAGAA TAGAGGCAAT CACAGGTTTT GCTAGCTTAA CTTATTTAGA GAACTTGGAA
ACAAATTGGA AAAAAATTAA AGAAGAACTT GATGCAACGG ATGAGAATGT TTTTGTAAAA
ATAGAAAAAT TAAAGGAAGG GATAAAACAA CTTGAGTTAA AAATTAAAGA AATTCAAAAG
AATATGATAA ATATAAAGCA GATATTAAAT AACGTTCAAA TTGAAAATGA AATAAAATAT
CTAGTTTATG AATTTGAAGG TGTGGAGCAA AATACTTTAA GAGATTTAGC AGATAAGCTA
ATAGATAGAG GAGTAGACCT TGTGGTGTTT TTTAACAAGC AAGGTGATAA AGTTATTTTG
ATTGTTAAGA GAAAAAAGAC TTTTGAAAAA TTGCATGCAG GAAACATTGC AAAGTCTTTA
TCTAAGATTC TTGATGGTGG TGGCGGTGGT AGACCTGATT TTGCCCAAGC AGGTGGAAAA
GATGTTTCCA AAATTAATGA AGCAAAAAGT AAATTAATAG AGATATTAAG GGAGTGTTAG
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| Protein sequence | MLSEEIRQLF LEFFEKKGHK ILPSASLIPD DPQLMFTVAG MVPFKPIFWG KVDPVYPRVT
TCQKCIRTTD IENVGRTPRH HTFFEMLGNF SFGDYFKREA IEWAWEFVTQ VLKIPEERLW
ISVYEEDEEA YDIWRKIGVS SNKIVKLGKE DNFWGPAGPT GPCGPDTEIF YDTGKEVPIT
DGKEPNPGNT EGRFVEIWNL VFTEYYQDEN GQLLPLKRKN IDTGAGLERI AAMMQGVYYN
FDTDLFLPII NRITDVLNVE YGRDEKHDVS IRVIADHIRA LVFLISDGVF PSNEGRGYIL
RRILRRAARH GKMLGSEKPF LHNIVDAVVE KMGKIYPEIV EKQSFVKEII YGEEERFLQN
LNKGLDIVDK IVKETGGKID GEAAFKLYDT YGFPLDILRD LANENGYILD EEGFNKYMEQ
QRKKAREAAG EVEFSERTDY ETLDISTKFV GYDVLSTNAR VLKIRTEKFV DEVKDVECEL
ILDETPFYPE KGGQVADKGV IKGKNGEFVV TNVYVPVEGI IVHKGKLKGK IRVGDAIFAS
VDEKKRKATA RNHTATHLLH AALRKVLGTH VRQAGSLVAP ERLRFDFTHY AALTKEEIEK
IEKMVNEKIL EAIDVNTKVM SYDEAIKNGA MALFEEKYGD KVRVVRIRDF SEELCGGTHV
KNTGEIGLFK IISESSVSAG VRRIEAITGF ASLTYLENLE TNWKKIKEEL DATDENVFVK
IEKLKEGIKQ LELKIKEIQK NMINIKQILN NVQIENEIKY LVYEFEGVEQ NTLRDLADKL
IDRGVDLVVF FNKQGDKVIL IVKRKKTFEK LHAGNIAKSL SKILDGGGGG RPDFAQAGGK
DVSKINEAKS KLIEILREC
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