Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1188 |
Symbol | |
ID | 5297776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1207476 |
End bp | 1208975 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640769465 |
Product | extracellular solute-binding protein |
Protein accession | YP_001306427 |
Protein GI | 150021073 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000019193 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TTCTGATTAT TTTTGTTTTG ATGCTTGTTG CTCTTTCTTT TGCAAGTAGT GTTATTGTTG TTGGAACTAC CGATAAGATA AGGACACTTG ACCCGGCAAA TTGTTATGAT TATTTTTCCA GTAATATTTT GCAAAATGTG TTAGCCGGAC CTGTGGATTA CGAAATTGGA ACTGCTAATA TAAAACCATG GTTGTTTGAA AAGTGGGAAG TATCAAGTGA TGGATTAGTT TACACTTTTC ACATAAGAAA AAATGCGTTT TTTGAAGATG GAACGCAGAT TGATGCCAAT GTTTTTAAAT TTTCATTTGA TCGTGTTATG AGGTTAAACG GGGATCCAGC GTTTTTATTG TCGGATGTGG TAGAAAAAAC GGAAGTAGTT GATAAGTTCA CATTTAGGGT GTATTTAAAA AACAAATTTT CCGCGTTTGT ATCCGTTTTA GGGTATACAG TGGCATTTCC TGTAAATCCA AAAGTTGCGC CTAAAGATAG ATTCTTAGAT TCAGCACCTT CTGCGTCTGG ACCGTATAGA ATTAGTGAAT GGATTAGGGA CGTAAGGATT GTTTTGGAAG AAAATCCAAA GTATTTTGGT CCAAAGCCAA AGACAAAAAA GATAATCATT CAATTTTACG AAAATTCCCA ACAGTTGAGA CTTGCGTTGG AAACAGGAGA GGTAGATATA GCATACAGGC ATCTTGATCC AAGAGACATA TTGGATTTAC AAAATGTTCC AGGTATAAAG GTTTATTTAG GTGCAAGTCC GCAAATAAGA TATCTTGTTT TGAATGTAAA GCAAAAACCG TTTGATAATC CATTGGTTAG ACAAGCAATT GCACTTGCTG TAGATAGAAA TGCAATTGTG AAGGATATTT TTGTAGATCT TGCAAAACCG TTATACTCAA TGATACCAGC AGGAATGTGG AGCCATGAAG ATGTATTTCC AATGAGGGAT TTACAAGCTG CTAAAAAAAT TTTAAAGGTT GCAGGTTATA ATGAAGATAA TCCTTTAATA ATAGATTTGT GGTATACTCC TTCGCATTAC GGTACAACTG AAGCTGATGT GGCACAAGTT TTGAAGAGCT CCCTTGAAGA AACTGGAATA ATAAAGGTGA ATATAAAATA TGCGGAGTGG TCAACGTATG TTGAATATTT TTTGAACGGT ACTATGGGAT TATTCCTGCT AGGATGGTAT CCAGATTATC TTGATCCGGA TGATTATTTG TGGCCATTCT TGAGTATAAG TGGTGCAAAA TCACTTGGAA GTTTTTATGA AAACAAAATA GTTGAAGACC TTATGATTGC AGGTAGAGCG GCAACTAACC AAAAAGCCCG TGAGGAAATT TATAAACTAG TTCAAAATTA TCATGCAGCT GATATGCCTT ATATTCCTCT TTGGCAAGGG TCTGCCGATT GTGAAACCCA CGATTACATC AAAGGTATAG TATTAGAGCC TACTCAAATA TTTAGATATT ACTTGTTAGA GAGAAAGTAA
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Protein sequence | MKKFLIIFVL MLVALSFASS VIVVGTTDKI RTLDPANCYD YFSSNILQNV LAGPVDYEIG TANIKPWLFE KWEVSSDGLV YTFHIRKNAF FEDGTQIDAN VFKFSFDRVM RLNGDPAFLL SDVVEKTEVV DKFTFRVYLK NKFSAFVSVL GYTVAFPVNP KVAPKDRFLD SAPSASGPYR ISEWIRDVRI VLEENPKYFG PKPKTKKIII QFYENSQQLR LALETGEVDI AYRHLDPRDI LDLQNVPGIK VYLGASPQIR YLVLNVKQKP FDNPLVRQAI ALAVDRNAIV KDIFVDLAKP LYSMIPAGMW SHEDVFPMRD LQAAKKILKV AGYNEDNPLI IDLWYTPSHY GTTEADVAQV LKSSLEETGI IKVNIKYAEW STYVEYFLNG TMGLFLLGWY PDYLDPDDYL WPFLSISGAK SLGSFYENKI VEDLMIAGRA ATNQKAREEI YKLVQNYHAA DMPYIPLWQG SADCETHDYI KGIVLEPTQI FRYYLLERK
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