Gene Tmel_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1182 
Symbol 
ID5297725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1201159 
End bp1201596 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content34% 
IMG OID640769459 
ProductRpiB/LacA/LacB family sugar-phosphate isomerase 
Protein accessionYP_001306421 
Protein GI150021067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR01120] ribose 5-phosphate isomerase B
[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATAG CAATTGGAAG TGATCATGCA GGATTTGAAT TGAAGGAAAA AATAAAAAAA 
TACCTCATGG ATAAAGATAT AGATGTATTG GATTTTGGTA CAGATAATAA GGAAAGTGTG
GATTATCCTG ATTTTGCGGA AAAGGTTGGA ACATCTGTTA AAAACAAAGA AGTAGAATTT
GGTATATTAA TCTGCGGAAC AGGTATAGGT ATGTCCATAG CAGCAAATAA GATTAAGGGT
ATAAGAGCTG CACTTTGTAC AATACCAGAA ATGGCAAGCC TTGCAAGAAA ACACAATAAT
GCAAATATTT TGGTGTTACC CGGCAGACTT ATTGGTTTTG AACTTGCTAC TTGGATATTA
GACGCATTTT TAAATGCCAC ATTCGAAGGA GGAAGGCATG AAAGAAGAAT AAGCAAAATT
TCTCGTTTGG AGGAATAA
 
Protein sequence
MKIAIGSDHA GFELKEKIKK YLMDKDIDVL DFGTDNKESV DYPDFAEKVG TSVKNKEVEF 
GILICGTGIG MSIAANKIKG IRAALCTIPE MASLARKHNN ANILVLPGRL IGFELATWIL
DAFLNATFEG GRHERRISKI SRLEE