Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1170 |
Symbol | |
ID | 5297302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1190199 |
End bp | 1192007 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640769447 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001306409 |
Protein GI | 150021055 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [COG3411] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTGG CAACAAATAC AATTCTTATC TGTGCTGGTG GTGCATGTAT ATCAGCTGGT GAAGAAAGCG TAAAAGACGT TTTGGAAAGA AAAATAAAAG AATACAATCT ACAAGAAACC GTAAATATAG TTGAAACCGG ATGTATGGGT GCTTGTAGTT TAGGACCTAT TATGGTAATC CATCCCGAAG GTGTATATTA CCAAAAATTA ACACCTGAAG CAGCTGAAAA AATTGTAGAA GAACACCTTT TAAAGGGAAG AGTTGTAGAA GAATACCTTT ATCAAGGAGA TAAAGGGAAA ATAGTTCCAC AACCTCAAAA AGAAATTCCA TTCTTTTCTA GACAGGTAAA AATAGCAACA AGAAACGTTG GTATAATTGA CCCAAAAAAT ATAGATGAAT ACATTGCACG GGATGGGTAC TTTGCCTTAC ACAAAGCTTT AAAGGAAATG ACACCTGAAG AAGTAATTCA AGTAGTAAAA GATAGTGGAC TTCGTGGTAG AGGTGGTGCA GGATTCCCAA CTGGTTTAAA ATGGGAATTT GCAAGAAAGT CACCTGGAGA TGAAAAATAC ATGATATGTA ATGCTGACGA AGGTGACCCA GGTGCATTTA TGGATAGGTC TATATTAGAA GGTGATCCAC ATACAATTAT AGAGGCAATG ACCATTGCAG GTTATGCAAT TGGTGCAACA AAAGGTTTTG TATATGTAAG AGCAGAATAT CCAATAGCAA TTGAAAGACT TACTGTTGCT TTAAATCAAG CAAGAGAATA TGGATTTTTA GGTGAAAACA TACTTGGAAC TGATTTTTCA TTTGATATTG AAATAAGAAT TGGCGCAGGT GCATTTGTTT GTGGTGAAGA AACGGCATTA ATGCATTCAA TCGAAGGCAA AAGAGGACAA CCAAGGGTTA AACCTCCATT CCCCGCTCAA AAAGGGCTTT GGGGAAAACC AAGTAACATA AACAACGTGG AAACACTTGC ATGTGTTCCA CCAATAATTT ACAACGGTGC TAGCTGGTTT AGACAATGGG GAACAGAAAA ATCTCCAGGC ACAAAGGTTT TCGCATTGGC AGGTAAAGTT AAAAACACTG GACTAGTTGA AGTTCCTATG GGAATTACCT TAAGGGAGCT TATATACGAA ATCGGTGGTG GTTCACCAAC TGGTAAAAAG ATAAAAGCTG TTCAAACAGG TGGCCCAAGT GGTGGAGTTA TCCCAGAAGA ATATTTCGAT ACACCTGTTG ACTATGAATC ACTTCAGAAA TTGGGAGCAA TAGTCGGTTC TGGAGGTTTA ATTGTTTTAG ATGAAGATGA TTGTATGGTA GACGTTGCCA AATTCTTCTT AGAGTTTACC GTTGATGAAT CATGTGGTAA ATGTACACCA TGTAGAGAAG GGACAAAGAA AATGTACGAA ATTTTAGATA AAATAACAAA AGGGGAAGGG ACAGAAGAAG ATATAGAAAT ATTGGAAAAC CTTGGAAATG TAATTAAAGA TTCATCCCTA TGCGGTCTTG GACAAACAGC ACCAAATCCC GTACTTTCTA CCTTAAGGTA CTACAAAGAC GAATATATTG CACATGTAAA AGAAGGAAAA TGTCCAGCGA AGAAGTGTAA AGACTTAATA AGCTATGTAA TCGATCCAGA AAAATGTGTT GGTTGTACTG CATGTGCAAG GGTATGTCCG GCAAGTTGTA TATCTGGAGA AGTTAGAAAG GTACACGAAA TCGATCAATC AGCTTGTGTA AAATGTGGAA GTTGTATAGA AGTCTGTAGA TTTGGTGCAA TTAGCAAAGT AACACCTGCA ATAGAATAA
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Protein sequence | MPLATNTILI CAGGACISAG EESVKDVLER KIKEYNLQET VNIVETGCMG ACSLGPIMVI HPEGVYYQKL TPEAAEKIVE EHLLKGRVVE EYLYQGDKGK IVPQPQKEIP FFSRQVKIAT RNVGIIDPKN IDEYIARDGY FALHKALKEM TPEEVIQVVK DSGLRGRGGA GFPTGLKWEF ARKSPGDEKY MICNADEGDP GAFMDRSILE GDPHTIIEAM TIAGYAIGAT KGFVYVRAEY PIAIERLTVA LNQAREYGFL GENILGTDFS FDIEIRIGAG AFVCGEETAL MHSIEGKRGQ PRVKPPFPAQ KGLWGKPSNI NNVETLACVP PIIYNGASWF RQWGTEKSPG TKVFALAGKV KNTGLVEVPM GITLRELIYE IGGGSPTGKK IKAVQTGGPS GGVIPEEYFD TPVDYESLQK LGAIVGSGGL IVLDEDDCMV DVAKFFLEFT VDESCGKCTP CREGTKKMYE ILDKITKGEG TEEDIEILEN LGNVIKDSSL CGLGQTAPNP VLSTLRYYKD EYIAHVKEGK CPAKKCKDLI SYVIDPEKCV GCTACARVCP ASCISGEVRK VHEIDQSACV KCGSCIEVCR FGAISKVTPA IE
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