| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1138 |
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| Symbol | |
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| ID | 5298469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1161915 |
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| End bp | 1163291 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640769416 |
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| Product | glutamate synthase (NADPH), homotetrameric |
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| Protein accession | YP_001306378 |
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| Protein GI | 150021024 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTAA AAGATAGAAT TAAACCAATT GTAAGAGAAC TTAATGAAAG AATAAAAGAC
TTTAATGAGG TATCATTGGG ATATACATGG GAACTTGCAG TTGAAGAAGC AAAAAGATGT
TTGCAATGTA AAATTCCCAC TTGTGTACAA GGCTGCCCTG TTGGAATAGA TATCCCAGGA
TTTATAAAAG AAATTGTCCA AGGAAACTTT CAAAATTCCT ACAAAATATT GAAAAAATAC
AATTCACTTC CCGCTGTATG CGGTAGAGTT TGTCCTCAAG AAATCCAATG TGAAGGTTCA
TGTATCTTAA ACAAAACAGG GAAACCAATA GCAATTGGAC TTCTCGAGAG ATTTGTGGCA
GATTGGGCAT CTGAAAATGC TATTGAAGAA AAAATTACTA TAGAGAAAAC TACAAATAAG
AAAGTAGCGG TTATAGGTGC TGGACCCGCT GGACTTACAA ACGCTTCTGA ACTTGCAAAA
TATGGATTCA AAGTAGATAT ATATGAAGCA TTTTCAGAAC CCGGTGGAGT ACTAATCTAT
GGAATACCTG AATTTCGTTT ACCAAAATCT ATTGTAAAAA GGGAAGTAGA TTTCTTAAAA
AAACTTGGAG TAAATATTAC CTTAGATATT CCAGTAGGTT ATGCAATTGA ACCTGAAGAA
CTCATTGAAA AATACGATGC CATATTTATT GGAGTAGGTG CTGGTACTCC AAAATTTATG
AATATTGCAG GCACAGAACT AAATGGTGTA TATTCGGCAA ATGAATTTTT AACCAGAATA
AACCTGATGA AGGCATTTAA ATTCCCCGAA TATGATACTC CGGTAAAAAT AGGAAAAAAA
GTCGTGGTAA TTGGTGGTGG AAATACCGCT ATGGATGCCG CAAGAAGTGC ATTTAGATTG
GGTGCAGAGG TAACTATAGT TTACAGAAGA AGTGAAAAAG AAATGCCGGC AAGAAAAGCA
GAAATCCATC ATTCAAAAGA AGAAGGAATA AAATTTCAAC TCTTAACCCA GCCAATAGAA
TACGTTGGGG ATGAAAATGG AAAACTAAAA GCTATAAAAT GCGTAAAGAT GAAGTTGGGA
GAACCAGATA CAGGGGGTAG AAGAAGACCT CTTCCCATAG AAAACAGTGA ATTCTTTATA
GAAGCAGACA TAGCTATAGA AGCTATTGGA ACAAACTCCA ATAAGTTATT GCTCTCAAAG
TTTAAAGGAT TGGAATTAAA TAAATGGGGA TACATCAAAA CAGATGAATT TGGTCAAACA
AGTATCCCAA AAGTATTTGC AGGTGGAGAT ATTGTAACTG GTTCTGCAAC TGTTATACTT
GCAATGGGAG CCGGAAAAAA AGCAGCAAAA AAGATGAAAG AATTTTTAGA AACCTAA
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| Protein sequence | MAVKDRIKPI VRELNERIKD FNEVSLGYTW ELAVEEAKRC LQCKIPTCVQ GCPVGIDIPG
FIKEIVQGNF QNSYKILKKY NSLPAVCGRV CPQEIQCEGS CILNKTGKPI AIGLLERFVA
DWASENAIEE KITIEKTTNK KVAVIGAGPA GLTNASELAK YGFKVDIYEA FSEPGGVLIY
GIPEFRLPKS IVKREVDFLK KLGVNITLDI PVGYAIEPEE LIEKYDAIFI GVGAGTPKFM
NIAGTELNGV YSANEFLTRI NLMKAFKFPE YDTPVKIGKK VVVIGGGNTA MDAARSAFRL
GAEVTIVYRR SEKEMPARKA EIHHSKEEGI KFQLLTQPIE YVGDENGKLK AIKCVKMKLG
EPDTGGRRRP LPIENSEFFI EADIAIEAIG TNSNKLLLSK FKGLELNKWG YIKTDEFGQT
SIPKVFAGGD IVTGSATVIL AMGAGKKAAK KMKEFLET
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