Gene Tmel_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1057 
Symbol 
ID5296563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1085683 
End bp1086243 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content24% 
IMG OID640769340 
Producthypothetical protein 
Protein accessionYP_001306302 
Protein GI150020948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00111473 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGC TAATTAGAGG TTGTGGAGTA TTTTTTCTAA TAATAATTAT ATTTGCAACA 
ATAATATACT TTACATCTTC GAAAAAAGAA CTAGAGGAAA TGGGAATAGG AGAAATAAAA 
ACACTTCTTC AATACAAAGA AGCAGTAGAA AAAGAAGTGT CATGGGACAC ATTTAAAAAA 
TACACTTCAT TAAAATTCTT ATATGAATTA CGTAAAATGG ACTCCTCAAA TCCAGATATA 
TACATAGAAA AATTGGAAAA TTACAAAAGT AATATTAATA AACTAACTTC TCTTGTAATA 
AGACTAAAAA GCAAAATTGA TAACGAAGAG ATAAAGAAAT TAAACGATTT ATTTGAAAAA 
TACTTTAGAA TAACATACAA ATTTTCAGAA GATTTTATAA ATTACATCGA AAATATCACT 
AGTAGCATGA TGACATATTA CAGAAAAAAA CTGGATAAAA CATCAGATGA AATGGTTTCA 
ATGTTAGATA AAATAAAAGA TAGATACAAA TATATCATAG AATCACAAAA TGAAACAGAC 
ATATTGGAAA TATTAAAATA G
 
Protein sequence
MKRLIRGCGV FFLIIIIFAT IIYFTSSKKE LEEMGIGEIK TLLQYKEAVE KEVSWDTFKK 
YTSLKFLYEL RKMDSSNPDI YIEKLENYKS NINKLTSLVI RLKSKIDNEE IKKLNDLFEK 
YFRITYKFSE DFINYIENIT SSMMTYYRKK LDKTSDEMVS MLDKIKDRYK YIIESQNETD 
ILEILK