Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1014 |
Symbol | |
ID | 5297004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1039006 |
End bp | 1039827 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640769298 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001306260 |
Protein GI | 150020906 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA ATACGTATAT CATAAGGAGA ATTATTCTAT TAATCATCAC TTTCATATAC CTATTACCCT TTTTTTGGAT GATAGGCACT TCACTAAAAC CTGATAGTGA ACTTTTAACT TTTCCACCAA AAATATTTCC ACAGAATCCA GATTGGAGCA ATTACAAAAA AGCTTTGGAA AAATTTCCTT TTTTTCTTTA CTTAAAAAAT AGTATAATTA TTACCATAGG AAACCTTGTT GGGGTTGTTT TTTCCGCTCC ATTTGTTGCA TACGGATTTT CAAAAATAAA ATGGCGGGGA AGAAACTTTT TCTTTGCTGT TATGATGGCA AGTATAATGC TTCCTGGTGC AGTAACGATG ATACCTGTCT TTCTTATATA CAAACATCTT GGATGGCTAG ATACATTTCT TCCGCTAATA GTACCTGCCT TTTTAGGGGG TGGTGCTATG AATGTGTTTT TAATAAGGCA ATTTTTCAAC ACTATTCCAA ACGAAATAAT TGAAGCCGCA AAAATCGATG GTGCAAGTGA CTTTAAAATA TTTTTTAAAA TAATGCTCCC CCTATCAAAA CCCGTCTTGG CATTAGTTTC ACTCTTTACA TTTACAGGCA CCTGGAACAA CTATATGGGA CCTTTAATCT ATATCACTAG CGAAACAAAA TATCCTCTTG CTTTAGGTAT GCCTATGTTT ATGAGTAGAT ACGGTACGTA CTGGAATCAA GCTATGGCAG CTGCAACGCT TACTCTTATT CCAACAATTA TCTTTTTCTT TATCGCACAA AAGTATTTAA TAGAAGGTAT TAAACTTACT GGAATAAAAT AA
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Protein sequence | MRKNTYIIRR IILLIITFIY LLPFFWMIGT SLKPDSELLT FPPKIFPQNP DWSNYKKALE KFPFFLYLKN SIIITIGNLV GVVFSAPFVA YGFSKIKWRG RNFFFAVMMA SIMLPGAVTM IPVFLIYKHL GWLDTFLPLI VPAFLGGGAM NVFLIRQFFN TIPNEIIEAA KIDGASDFKI FFKIMLPLSK PVLALVSLFT FTGTWNNYMG PLIYITSETK YPLALGMPMF MSRYGTYWNQ AMAAATLTLI PTIIFFFIAQ KYLIEGIKLT GIK
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