Gene Tmel_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0988 
Symbol 
ID5296882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1007618 
End bp1008163 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content33% 
IMG OID640769272 
Productlipoprotein signal peptidase 
Protein accessionYP_001306234 
Protein GI150020880 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00914153 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTTGGA TTACTTTGGC GTTTGTAATA GATCAAATTA CAAAGTATAT AGCGACAAAT 
TATTGGAGGT TTAATCCAAA AAAAGTGTTG TTTTTTTATT TTACCTATGC AACAAACAAA
GGGGTTGCAT TTGGGCTTTT TTCAAATTCA AAAGAAATAG TTGTGTATTT AACGCTTGCA
ATTACGATAT TTTTGTCTAT AATACCACTT GTAAAAAGAC TTGATTTTTT GACAAATATG
TTTCTGGGAT TTATTATTGG TGGAGCCTTA GGAAACGTAG TGGATAGAAT TAGATTTGGA
TATGTAGTAG ACTTTGTAAC TATGCCTTAC TGGCCCACAA TATACAATCT AGCTGATTTT
TTCATACTTT TAGGTGGTAT TGGAATTGCT ATAATTTCTT TGCGGAGGAG AGATGTTGGA
AATTCAAGTA ACAGCACGGG AGAAGGGTTG GAGATTAGAC AAATTTATTC AAGAAAAAGC
ACCAGACTGG ATATCGAGAA CGTACATTCA AAGAGCGATC AAGAGTGGAA TGGTAACAGT
AAATAA
 
Protein sequence
MFWITLAFVI DQITKYIATN YWRFNPKKVL FFYFTYATNK GVAFGLFSNS KEIVVYLTLA 
ITIFLSIIPL VKRLDFLTNM FLGFIIGGAL GNVVDRIRFG YVVDFVTMPY WPTIYNLADF
FILLGGIGIA IISLRRRDVG NSSNSTGEGL EIRQIYSRKS TRLDIENVHS KSDQEWNGNS
K