Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0971 |
Symbol | rpmD |
ID | 5297322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 996836 |
End bp | 997021 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640769255 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001306217 |
Protein GI | 150020863 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TGAAGATTAC ATTAGTTAAA AGTCCCATAG GGTACAAATA CGATCAGAAA GATACAGTGA AAAGGCTTGG ATTAAGAAAA TTAAATTCTA CAGTGATAAA AGAAGACGTT CCTCAGGTTA GAGGTATGAT TAGAAAAGTA AGGCATTTGG TTAAAGTTGA GGAAATAGAG GAATAA
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Protein sequence | MKKLKITLVK SPIGYKYDQK DTVKRLGLRK LNSTVIKEDV PQVRGMIRKV RHLVKVEEIE E
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