Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0956 |
Symbol | rplB |
ID | 5296800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 990274 |
End bp | 991098 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640769240 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001306202 |
Protein GI | 150020848 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00125176 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCTTA AAAGATTTAA ACCAACAAGC CCTGCTAGAA GACAGATGAT AATACCGGAT TTTTCTGAAA TAACGAAGAA AGAACCAGAA AAATCTTTAA TTGCACCACT TAAGAAAACG GGTGGTAGGA ATAGTTATGG TAGAGTTACA GTAAGGTTTA GAGGTGGAGG ACATAAAAGA AAATATAGGA TAATTGATTT TAAAAGGGAT AAAGTTGGTA TACCAGCGAA AGTTGTATCT ATAGAGTATG ATCCGAATAG GACTGCCAGA ATAGCTTTAC TTGTGTACGC CGATGGTGAA AAAAGATATA TTCTTGCACC GCAGGATTTG AATGTTGGAG ATATGGTAAT GAATGGACCT GATGCAGAAA TAAAGCCGGG AAATGCGTTA CCATTAGAAA ATATTCCTGT AGGTACAGTT ATTCATAACG TAGAATATAT TCCTGGAAAA GGTGGACAAA TAGCGAGGTC TGCGGGTACT TCTTGCCAGC TTATGGCGAA AGAAGGAAAA TATGCGTTAT TGAGAATGCC ATCTGGTGAA TTAAGAAAAG TACCTGTAAA GTGTTATGCA ACCATTGGTG TTGTAGGCAA TGAGGATCAC AAAAACGAAG TTGATGGTAA AGCTGGTAGG GTAAGATGGA AAGGAAGAAA ACCTCATGTT AGAGGTGTTG CTATGAACCC AGTTGATCAC CCACATGGCG GTGGTGAAGG CAGAGGAAAA GGGCACCATC CACAAAGTCC ATGGGGTCAA TTGGCAAAGG GTTATAAAAC TAGAAGAGGA AAAAAAGCTT CAGATAAATT GATTGTTAGA AGAAGAAATG GTTAA
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Protein sequence | MGLKRFKPTS PARRQMIIPD FSEITKKEPE KSLIAPLKKT GGRNSYGRVT VRFRGGGHKR KYRIIDFKRD KVGIPAKVVS IEYDPNRTAR IALLVYADGE KRYILAPQDL NVGDMVMNGP DAEIKPGNAL PLENIPVGTV IHNVEYIPGK GGQIARSAGT SCQLMAKEGK YALLRMPSGE LRKVPVKCYA TIGVVGNEDH KNEVDGKAGR VRWKGRKPHV RGVAMNPVDH PHGGGEGRGK GHHPQSPWGQ LAKGYKTRRG KKASDKLIVR RRNG
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