| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0937 |
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| Symbol | |
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| ID | 5297769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 971626 |
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| End bp | 972360 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769219 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_001306183 |
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| Protein GI | 150020829 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTT TTGCTATTGA ATTTTCATAC GACGGAACAA ATTTCTTTGG TTATCAAGGA
CAACCAAATG TAAGAACTGT TCAAGGTGAG TTAGAAAAAG CACTTGAAAG AATTTTCAAA
GAAAGAATCT TTACACAAGG TGCTGGAAGA ACAGATGCTG GAGTTCATGC AAACGGACAA
GTTGCAGCAT TTAATTGTCC AATTGACAGA TTAGCTGCAA TTGACATTAA AAATGCATTA
AATGCAAACT TACCAGAAGA TATATATGTC AAAAAAGCAT GGGAAGTGGA AAAAAATTTT
AATCCACGTT TTAGAGCAAA AAAAAGAATT TACCATTATC TTGTATCTAC AAATGAAAAA
GATGTTTTCA AAAGAAATTA CGTCTGGCAT TTCAAATATA AATTAAACAT TGAGGCGATG
AGAATAGCTG CGCGTTATTT GGAAGGAGAA CATGACTTTT CTTCTTTTAA AAAAGGGAAT
GATAAAAAAA ATCCAATAAG GACGGTTTAT AGGATAAGGA TATTAAATGT TAAAAAAGAA
TTAATTTTAA TAAGAGTGGA AGGAAGATCT TTTTTAAGGA GTATGGTAAG AAATATTGTT
GGAAGTTTGG TGAGGGTGGG ATTGGGTCAA TGGACACCGG AAAAAATAAA AAAAGTTTTA
GAAGCACGTT CGCGGCAAGA GGCGGCTGGT ACGGCACCGC CACATGGTTT ATACTTATAC
AAAGTGTTAT TTTAA
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| Protein sequence | MKRFAIEFSY DGTNFFGYQG QPNVRTVQGE LEKALERIFK ERIFTQGAGR TDAGVHANGQ
VAAFNCPIDR LAAIDIKNAL NANLPEDIYV KKAWEVEKNF NPRFRAKKRI YHYLVSTNEK
DVFKRNYVWH FKYKLNIEAM RIAARYLEGE HDFSSFKKGN DKKNPIRTVY RIRILNVKKE
LILIRVEGRS FLRSMVRNIV GSLVRVGLGQ WTPEKIKKVL EARSRQEAAG TAPPHGLYLY
KVLF
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