Gene Tmel_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0875 
Symbol 
ID5298037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp909930 
End bp911261 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content33% 
IMG OID640769153 
Producthypothetical protein 
Protein accessionYP_001306121 
Protein GI150020767 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAAA TAAAAAAAAC GGGAAATATG AAGGTTGATG CATATATCCT AACAGATGAT 
ATATCATCTG TCTCAGAAGC GATCGAACAA TTAAAAAATG TGGCCTCATT ACCCAGCATA
GTAAAAGCCG CATATGCCAT GCCAGATATA CACTGGGGTT ATGGTTTTCC CATTGGTGGT
GTTGCCGCAT TTTCAGAAAT AATAAGTCCT GGAGGCGTTG GGTTTGACAT CAACTGTGGA
GTAAGATTAC TAAAGAGTAA TATAATATAT GACGAAATTT CAAAGCATTT AGAAAAAATC
ATTGAAGAAA TTTACAAATT AGTTCCAGTG GGACTTGGTT CCACATCAAA AAAATTCGAG
AAAAAACTAT TTAAAAAAAT AATAGAAAAT GGGGTAAAAG AAGTAATAGA AATGGGATAT
GGTAAAAATG AAGACCTTCT TTTCATTGAA GACAATGGCA CAATACATCC TGCAAGCATG
GAAGATATAT CCGAGTTGGC CTACAAGAGA GGAAGAGAAG AGTTGGGAAC TCTTGGTTCG
GGGAACCATT TTATTGAAAT TCAAAAAGTT GTAGAAATTT ACGATAAAGA AATTGCAAAT
ACCCTTGGAT TGTTTGAAAA CCAAATAACG GTAATGATAC ATACTGGTAG TAGAGGTTTT
GGGCATCAAG TAGCAACAGA TTATATAAAA CTTATGAGAA ATATAGACAA AAACCTTCCA
GACAAACAAT TGGTTTATGC ACCATTTTAC AGTAAACTTG GACAAAAATA TTTTTCAGCA
ATGAACTGTG CCGCAAATTT TGCATTTGCA AACAGACAGA TTATCACTCA TTACATCAGA
AAAGCGTTTT CAAACTTTTC AAGATTAGAT CTAATATACG ACGTGGCACA TAATATAGCA
AAAGTAGAAA TTCACGATAA CCAAAAGGTT GTAGTCCATA GAAAAGGTGC TACAAGGGCT
TTTGGGCCAA ATCAAAAAGA ACTTCCAGAA AAGTATAAAA AAATAGGCCA ACCAGTCATT
ATCCCAGGTG ATATGGGAAC TTCATCTTAT GTACTTGTAG GCACTAACAA AAACTTTGCA
TTTTCTTCAA CAGCTCATGG AGCAGGAAGA GTTCTCGGAA GAAGGCAAGC ATTAAAAAAT
TTAAAAATAA ACGAAGTACT TTCAAATTTA GAAAAAAAAG GTATAATATT AAAAAGTAAA
TCTAAAAAGA TCATAATCGA AGAAGCACCT GAGGTATATA AAAATATAGA CAAAGTAGTT
GAAATAGTGG ATAAATTGAA ACTATCAAAA AAGGTTGCAA AATTAATTCC TTTGGGGGTT
ATTAAGGGTT GA
 
Protein sequence
MYKIKKTGNM KVDAYILTDD ISSVSEAIEQ LKNVASLPSI VKAAYAMPDI HWGYGFPIGG 
VAAFSEIISP GGVGFDINCG VRLLKSNIIY DEISKHLEKI IEEIYKLVPV GLGSTSKKFE
KKLFKKIIEN GVKEVIEMGY GKNEDLLFIE DNGTIHPASM EDISELAYKR GREELGTLGS
GNHFIEIQKV VEIYDKEIAN TLGLFENQIT VMIHTGSRGF GHQVATDYIK LMRNIDKNLP
DKQLVYAPFY SKLGQKYFSA MNCAANFAFA NRQIITHYIR KAFSNFSRLD LIYDVAHNIA
KVEIHDNQKV VVHRKGATRA FGPNQKELPE KYKKIGQPVI IPGDMGTSSY VLVGTNKNFA
FSSTAHGAGR VLGRRQALKN LKINEVLSNL EKKGIILKSK SKKIIIEEAP EVYKNIDKVV
EIVDKLKLSK KVAKLIPLGV IKG