Gene Tmel_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0871 
Symbol 
ID5298125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp906264 
End bp906962 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content31% 
IMG OID640769149 
Productsugar nucleotidyltransferase-like protein 
Protein accessionYP_001306117 
Protein GI150020763 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1213] Predicted sugar nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGA TATTACTTGC AGCAGGTAAA GGTACAAGAA TTTCAAGAAA AATAGGAAAT 
ATTCCAAAGT CGTTAATTGA TATAAATGGT GAACCATTGA TATTAAAAAC TATTAGGATG
TTAAAAGAAA ATTTAGTAGA TATAAGTGTA GTGCTTGGGT ATAAAAAGCA TCTTTTCGAT
GAATATACTT ATGTATGTAA GGTATATTAC AATCCATTTT ACTCACTTAC CAATAGCATA
GCATCTCTTT GGTTTGCAAA AGACGAGATA GATGGTACAG AAGATATAAT AATTGCAAAT
GCTGATGTGT TTTGGGATGA GAATGTTTTG AGAGAACTTT TAAATTCTTC AGAAGACGTT
TTGATGTTAT ATGATTCTTC TAGAAAGGAA GAAGGTGATT ATTTGTTTAA AGTTGAAGGG
AATGTTTTAA TAGAACATGG AAAAGAATTG GAAGATCCGT CTGGGGAATA TGTAGGGGTG
TCAATTATTA GAAAAAAGTT TCAGAAAAAG TTCAGGGAGC GATTAGAAAG TCTAATAGAT
AATGAGAATT TTAGCTTGTG GTGGGAAAAT GTTTTATATT CGTTTATAGG AGAAAGAGAC
ATATATGTAA AAGATATCTC CGGGCTTTTC TGGGGAGAAG TAGATTATTT GGAGGATTAC
TATAGAATTT TAAGATATAT TGATAAAAGG AGTGAATGA
 
Protein sequence
MKAILLAAGK GTRISRKIGN IPKSLIDING EPLILKTIRM LKENLVDISV VLGYKKHLFD 
EYTYVCKVYY NPFYSLTNSI ASLWFAKDEI DGTEDIIIAN ADVFWDENVL RELLNSSEDV
LMLYDSSRKE EGDYLFKVEG NVLIEHGKEL EDPSGEYVGV SIIRKKFQKK FRERLESLID
NENFSLWWEN VLYSFIGERD IYVKDISGLF WGEVDYLEDY YRILRYIDKR SE