| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0838 |
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| Symbol | |
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| ID | 5298337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 877218 |
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| End bp | 878762 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769115 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001306084 |
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| Protein GI | 150020730 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTTG AGGATTTTAA CTTAAGTGAA AAAACGCTTT ACGCAATTAA CGAGAAAGGT
TTTGAAAAAC CAACACCTGT ACAGAAGCGA GTTATTCCAA TTTTGTTAAA CAAAGAAAAA
AATCTTATTG TACAGGCAAA AACGGGAACG GGAAAAACAG CTGCATTTGG TATACCACTT
ATAGAACTTT TAGAAAGTAA AGGTTATGTC CAAGCTATTA TATTGACTCC AACAAGGGAA
TTGGCCTTGC AGGTTTCAGA GGAAATAAAT TCGTTAAAAA GAAAGAGGTT AAAGATATTA
CCCGTATACG GTGGCCAGTC TATTAGTAGG CAAATTGAAC ATTTAAAAAG AGGTGTGGAT
ATAGTAGTTG GAACTCCGGG GAGAATTTTG GATCATTTAG AAAGAAAAAC AATAGATCTT
TCGAAGGTAG AGTATTTTAT TTTAGACGAA GCAGATGAAA TGCTTGATAT GGGATTTATA
GATGATGTCG AAAAGATTTT AAAAAGTACA AGTGACGAGA AAATCTTTCT AATGTTTTCC
GCAACTATAC CTAGAAGAAT AATTGACCTT GCAAAAAAGT ATATAAAAAA TTATGAGGTT
ATTAAAATAG CAGATAAACA GCTTACTACC AATCTTACAG AACAAATATA TATTGAATTA
AACGAAAATG ATAAATTTGA AGCACTTTGT AGAATAATAG ATGTAGAAGA CGATTTTTAT
GGCATGGTAT TTTGTAGAAC AAAGGTAGAA GTTGATAATG TTTCATCTAA ACTTATTGAA
AGAGGATATG ATGCGGAAGC ACTACATGGT GATTTTTCAC AGTATCAACG TGAAAGGGTA
CTGAAAAAAT TTAAAGAGAA AAGGATAAAT ATTCTAGTTG CAACGGATGT TGCTGCAAGA
GGAATAGATA TTTCAGGCTT AACTCATGTA ATAAATTATT CTATACCACT TAATCCCGAA
CATTATGTGC ATAGAGTAGG CAGAACGGGG CGAGCAGGGA GAGAAGGTGT AGCGATAACT
TTTGTAACTC CAAAAGAGTA CAGACAACTA TTTAGGATAA AGAAATTCTC AAAAGCAAAG
ATAAAGGAGG GAAAAATTCC ATCGGTTGAG CAGATAATAA GGGCAAAGTC TGAAAGAATA
AAAAGTGAAT TGTTAAAAGA AGAGAAAAAG TTACCGAATA TATATTACAA CCTTGCCGAT
GAGTTATTGA AAAAAACAAA TCCTAGGGAG GTAATAGCAA AGCTTTTGAA TATGTCTTTT
AAATCTTTAA ATCCCGAAAA ATATGAGAAA GTGTTACCGC CAAAGGAAAA TGAAGTGGTA
AGGTTGTTTA TAGCAAAAGG GAAGCAAGCA GGACTTACAA AAAAAGATCT TGTAAGATTT
ATAGTTGAAA AGACAAATAT AAGTCCTAAG GTGATAAGTG ATGTAGTTGT TCTTGATAAG
TTTTCTTTCA TAACCGTTCC GTATAAAGAA GCGGAAATTA TACTATCAAT ATTTAAAAAA
CGCGGTAGAA GATCGTTAAT CTCAAAAGCT AAAGAGAGAA ACTAG
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| Protein sequence | MNFEDFNLSE KTLYAINEKG FEKPTPVQKR VIPILLNKEK NLIVQAKTGT GKTAAFGIPL
IELLESKGYV QAIILTPTRE LALQVSEEIN SLKRKRLKIL PVYGGQSISR QIEHLKRGVD
IVVGTPGRIL DHLERKTIDL SKVEYFILDE ADEMLDMGFI DDVEKILKST SDEKIFLMFS
ATIPRRIIDL AKKYIKNYEV IKIADKQLTT NLTEQIYIEL NENDKFEALC RIIDVEDDFY
GMVFCRTKVE VDNVSSKLIE RGYDAEALHG DFSQYQRERV LKKFKEKRIN ILVATDVAAR
GIDISGLTHV INYSIPLNPE HYVHRVGRTG RAGREGVAIT FVTPKEYRQL FRIKKFSKAK
IKEGKIPSVE QIIRAKSERI KSELLKEEKK LPNIYYNLAD ELLKKTNPRE VIAKLLNMSF
KSLNPEKYEK VLPPKENEVV RLFIAKGKQA GLTKKDLVRF IVEKTNISPK VISDVVVLDK
FSFITVPYKE AEIILSIFKK RGRRSLISKA KERN
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