Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0819 |
Symbol | |
ID | 5298120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 859570 |
End bp | 860490 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640769096 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001306065 |
Protein GI | 150020711 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGAAAA AGAATTTAAT AATTGGTATA TCAATTATTT TACCCTCTAT TATTGCAATA GCAGTTTTTG TTTATGGGTT TATAAGCTGG ACTGTTAGAA CTTCTTTTTC AAATTGGAAT AGTTTTTCTG CTTTACTTAG AGGAACGTAT AAATTTGTTG GACTTAGAAA TTATATACGT TTATTCCAAG ATAGTAGGTT CCAAATTGAT CTATGGAACA CTTTGTTTTT CACCGTTTTC TTTTTGCTGG GAACAATTAC CCTTGGTGTT GTAATGGCAA TATTAGTAGA TAAAGGACTA AAGGGTTCAA GAATATTTCA AAATCTATTT TTATTTCCCA TGGCCATCTC TTTTGTGGTT ACGGGAACAG TTTGGAGTTG GATTTTTGCA CCAGGGAATA TCCCGTCAAA TCCTCAGGGA ATAAATTTGT TATTTCAAAA ATTGGGCTTG GAAAAGTTAA TGTGGGGATG GTATACAAGC ACGTATTCTA TTGGCAAGTT TAATGTTGCG TTGATCCCGG TAATCATTGC TGCAATTTGG CAGCTTTCTG GATATACTAT GGCAATGTAT TTAGCAGGTT TAAGGGGAAT TCCAAATGAT ATTATAGAAG CGGCAAAGGT AGATGGAGCA TCTGAATGGA AAATATTTTG GAAAATAAAG ATGCCACTTT TAACACCTAT TACATTGAGT GCATTGATAA TACTGGGGCA TATTTCACTA AAAATATTCG ATTTGGTATT TTCCATGACG GGAAGTGGAC CTAATTTTGT TACAGATGTG CCGGCAATTT ATATGTTTGA ATTGACATTT AGAAGTAATA GATACGCAAT GGGTTCAGCA ATAGCTATTG TAATGCTTTT GTTTGTTACG GTAGTTATCA TACCATATCT TATAACTAGC TTGAGAGGTG AAAGGAGATG A
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Protein sequence | MRKKNLIIGI SIILPSIIAI AVFVYGFISW TVRTSFSNWN SFSALLRGTY KFVGLRNYIR LFQDSRFQID LWNTLFFTVF FLLGTITLGV VMAILVDKGL KGSRIFQNLF LFPMAISFVV TGTVWSWIFA PGNIPSNPQG INLLFQKLGL EKLMWGWYTS TYSIGKFNVA LIPVIIAAIW QLSGYTMAMY LAGLRGIPND IIEAAKVDGA SEWKIFWKIK MPLLTPITLS ALIILGHISL KIFDLVFSMT GSGPNFVTDV PAIYMFELTF RSNRYAMGSA IAIVMLLFVT VVIIPYLITS LRGERR
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